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  5. Solyc04g077610

Solyc04g077610


Description : U-box domain-containing family protein (AHRD V3.3 *** B9GNN0_POPTR)


Gene families : OG_42_0004634 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g077610
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
Sopen04g031250 No alias U-box domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
BP GO:0016567 protein ubiquitination IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR003613 Ubox_domain 48 118
No external refs found!