Description : (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin (InterPro:IPR006670), G2/mitotic-specific cyclin A (InterPro:IPR015453), Cyclin-like (InterPro:IPR011028), Cyclin-related (InterPro:IPR013763), Cyclin, N-terminal (InterPro:IPR006671), Cyclin, A/B/D/E (InterPro:IPR014400); BEST Arabidopsis thaliana protein match is: CYCLIN A1;2 (TAIR:AT1G77390.1); Has 4548 Blast hits to 4417 proteins in 376 species: Archae - 0; Bacteria - 4; Metazoa - 1999; Fungi - 561; Plants - 1168; Viruses - 34; Other Eukaryotes - 782 (source: NCBI BLink). & (p30278|ccnb2_medsa : 124.0) G2/mitotic-specific cyclin-2 (B-like cyclin) (CycMs2) (Fragment) - Medicago sativa (Alfalfa) & (reliability: 312.0) & (original description: no original description)
Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Cyanophora release: evm.model.tig00000076.67 | |
Cluster | HCCA clusters: Cluster_64 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
230742 | No alias | CYCLIN B2;4 | 0.01 | Orthogroups_2024-Update | |
97411 | No alias | Cyclin A1;1 | 0.02 | Orthogroups_2024-Update | |
A4A49_20167 | No alias | cyclin-b2-4 | 0.02 | Orthogroups_2024-Update | |
A4A49_40931 | No alias | g2mitotic-specific cyclin s13-6 | 0.01 | Orthogroups_2024-Update | |
At1g20590 | No alias | Cyclin-B2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM91] | 0.02 | Orthogroups_2024-Update | |
At1g34460 | No alias | CYCLIN B1;5 [Source:TAIR;Acc:AT1G34460] | 0.01 | Orthogroups_2024-Update | |
At1g44110 | No alias | CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5] | 0.01 | Orthogroups_2024-Update | |
At1g76310 | No alias | CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310] | 0.02 | Orthogroups_2024-Update | |
Brara.B00199.1 | No alias | regulatory protein *(CYCB) of cell cycle | 0.01 | Orthogroups_2024-Update | |
Brara.C00237.1 | No alias | regulatory protein *(CYCB) of cell cycle | 0.02 | Orthogroups_2024-Update | |
Brara.E01810.1 | No alias | regulatory protein *(CYCA) of cell cycle | 0.01 | Orthogroups_2024-Update | |
Brara.E01867.1 | No alias | regulatory protein *(TAM) involved in metaphase to... | 0.02 | Orthogroups_2024-Update | |
Brara.E02490.1 | No alias | regulatory protein *(CYCA) of cell cycle | 0.01 | Orthogroups_2024-Update | |
Brara.F02538.1 | No alias | regulatory protein *(CYCB) of cell cycle | 0.02 | Orthogroups_2024-Update | |
Brara.G00692.1 | No alias | regulatory protein *(CYCB) of cell cycle | 0.01 | Orthogroups_2024-Update | |
Brara.H00423.1 | No alias | regulatory protein *(CYCA) of cell cycle | 0.02 | Orthogroups_2024-Update | |
Brara.I04921.1 | No alias | regulatory protein *(CYCA) of cell cycle | 0.02 | Orthogroups_2024-Update | |
Cre03.g207900 | No alias | Cyclin A2;4 | 0.02 | Orthogroups_2024-Update | |
Glyma.01G159700 | No alias | Cyclin B2;3 | 0.02 | Orthogroups_2024-Update | |
Glyma.02G277600 | No alias | Cyclin family protein | 0.01 | Orthogroups_2024-Update | |
Glyma.03G123600 | No alias | Cyclin family protein | 0.01 | Orthogroups_2024-Update | |
Glyma.04G001100 | No alias | Cyclin B2;3 | 0.01 | Orthogroups_2024-Update | |
Glyma.04G043600 | No alias | Cyclin A3;1 | 0.02 | Orthogroups_2024-Update | |
Glyma.04G071600 | No alias | mitotic-like cyclin 3B from Arabidopsis | 0.03 | Orthogroups_2024-Update | |
Glyma.04G246600 | No alias | Cyclin A1;1 | 0.01 | Orthogroups_2024-Update | |
Glyma.06G043900 | No alias | CYCLIN A3;4 | 0.02 | Orthogroups_2024-Update | |
Glyma.06G072900 | No alias | mitotic-like cyclin 3B from Arabidopsis | 0.02 | Orthogroups_2024-Update | |
Glyma.06G116100 | No alias | Cyclin A1;1 | 0.01 | Orthogroups_2024-Update | |
Glyma.07G034100 | No alias | Cyclin A2;4 | 0.01 | Orthogroups_2024-Update | |
Glyma.11G084500 | No alias | Cyclin B2;3 | 0.02 | Orthogroups_2024-Update | |
Glyma.14G037100 | No alias | Cyclin family protein | 0.02 | Orthogroups_2024-Update | |
Glyma.19G127200 | No alias | Cyclin family protein | 0.01 | Orthogroups_2024-Update | |
Kfl00112_0070 | kfl00112_0070_v1.... | (at1g80370 : 326.0) Cyclin A2;4 (CYCA2;4); CONTAINS... | 0.03 | Orthogroups_2024-Update | |
Kfl00560_0010 | kfl00560_0010_v1.1 | (at1g76310 : 298.0) core cell cycle genes; CYCLIN B2;4... | 0.01 | Orthogroups_2024-Update | |
MA_28323g0010 | No alias | (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... | 0.03 | Orthogroups_2024-Update | |
MA_6619g0010 | No alias | (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... | 0.02 | Orthogroups_2024-Update | |
MA_88982g0010 | No alias | (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... | 0.01 | Orthogroups_2024-Update | |
PSME_00027402-RA | No alias | (at1g76310 : 197.0) core cell cycle genes; CYCLIN B2;4... | 0.01 | Orthogroups_2024-Update | |
Potri.002G010000 | No alias | CYCLIN B2;4 | 0.01 | Orthogroups_2024-Update | |
Potri.005G100000 | No alias | Cyclin B2;1 | 0.01 | Orthogroups_2024-Update | |
Pp1s271_10V6 | No alias | ccb15_orysj ame: full=cyclin-b1-5 ame: full=g2... | 0.01 | Orthogroups_2024-Update | |
Solyc01g009040 | No alias | cyclinB1_4 | 0.01 | Orthogroups_2024-Update | |
Solyc02g082820 | No alias | cyclin B2 | 0.01 | Orthogroups_2024-Update | |
Solyc03g032190 | No alias | cyclinB2_7 | 0.01 | Orthogroups_2024-Update | |
Solyc03g120440 | No alias | cyclin A2_1 | 0.02 | Orthogroups_2024-Update | |
Solyc04g082430 | No alias | cyclinB2_4 | 0.01 | Orthogroups_2024-Update | |
Solyc06g065680 | No alias | cyclin A2 | 0.05 | Orthogroups_2024-Update | |
Solyc07g066660 | No alias | cyclinB3_1 | 0.01 | Orthogroups_2024-Update | |
Solyc10g078330 | No alias | B-type cyclin | 0.01 | Orthogroups_2024-Update | |
Solyc10g080950 | No alias | cyclinB1_2 | 0.01 | Orthogroups_2024-Update | |
Solyc11g005090 | No alias | cyclin A1 | 0.03 | Orthogroups_2024-Update | |
Solyc12g088470 | No alias | cyclin A3_4 | 0.03 | Orthogroups_2024-Update | |
Solyc12g088500 | No alias | cyclin A3_5 | 0.01 | Orthogroups_2024-Update | |
Sopen01g004530 | No alias | Cyclin, N-terminal domain | 0.01 | Orthogroups_2024-Update | |
Sopen03g006030 | No alias | Cyclin, N-terminal domain | 0.01 | Orthogroups_2024-Update | |
Sopen03g039320 | No alias | Cyclin, N-terminal domain | 0.01 | Orthogroups_2024-Update | |
Sopen04g036020 | No alias | Cyclin, N-terminal domain | 0.02 | Orthogroups_2024-Update | |
Sopen06g024200 | No alias | Cyclin, N-terminal domain | 0.02 | Orthogroups_2024-Update | |
Sopen10g031460 | No alias | Cyclin, N-terminal domain | 0.01 | Orthogroups_2024-Update | |
evm.model.contig_554.3 | No alias | (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Predicted GO |
BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Predicted GO |
BP | GO:0000278 | mitotic cell cycle | IEP | Predicted GO |
CC | GO:0000444 | MIS12/MIND type complex | IEP | Predicted GO |
CC | GO:0000775 | chromosome, centromeric region | IEP | Predicted GO |
CC | GO:0000776 | kinetochore | IEP | Predicted GO |
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
CC | GO:0000818 | nuclear MIS12/MIND complex | IEP | Predicted GO |
MF | GO:0003774 | motor activity | IEP | Predicted GO |
MF | GO:0003777 | microtubule motor activity | IEP | Predicted GO |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Predicted GO |
MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
MF | GO:0005515 | protein binding | IEP | Predicted GO |
MF | GO:0005524 | ATP binding | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
CC | GO:0005815 | microtubule organizing center | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006333 | chromatin assembly or disassembly | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
BP | GO:0006515 | protein quality control for misfolded or incompletely synthesized proteins | IEP | Predicted GO |
BP | GO:0006928 | movement of cell or subcellular component | IEP | Predicted GO |
BP | GO:0006996 | organelle organization | IEP | Predicted GO |
BP | GO:0007010 | cytoskeleton organization | IEP | Predicted GO |
BP | GO:0007017 | microtubule-based process | IEP | Predicted GO |
BP | GO:0007018 | microtubule-based movement | IEP | Predicted GO |
BP | GO:0007049 | cell cycle | IEP | Predicted GO |
MF | GO:0008017 | microtubule binding | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
MF | GO:0008144 | drug binding | IEP | Predicted GO |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
MF | GO:0015631 | tubulin binding | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
MF | GO:0017076 | purine nucleotide binding | IEP | Predicted GO |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Predicted GO |
BP | GO:0031144 | proteasome localization | IEP | Predicted GO |
CC | GO:0031262 | Ndc80 complex | IEP | Predicted GO |
BP | GO:0031503 | protein-containing complex localization | IEP | Predicted GO |
MF | GO:0032553 | ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Predicted GO |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
BP | GO:0034453 | microtubule anchoring | IEP | Predicted GO |
BP | GO:0034629 | cellular protein-containing complex localization | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
MF | GO:0043168 | anion binding | IEP | Predicted GO |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Predicted GO |
CC | GO:0044422 | organelle part | IEP | Predicted GO |
CC | GO:0044427 | chromosomal part | IEP | Predicted GO |
CC | GO:0044430 | cytoskeletal part | IEP | Predicted GO |
CC | GO:0044446 | intracellular organelle part | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
BP | GO:0051276 | chromosome organization | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0071630 | nuclear protein quality control by the ubiquitin-proteasome system | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Predicted GO |
CC | GO:0098687 | chromosomal region | IEP | Predicted GO |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
No external refs found! |