Description : MADS-box transcription factor family protein (AHRD V3.3 *** G7ZXM5_MEDTR)
Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc04g078300 | |
Cluster | HCCA clusters: Cluster_8 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_22632 | No alias | floral homeotic protein agamous | 0.03 | Orthogroups_2024-Update | |
Bradi2g26320 | No alias | AGAMOUS-like 62 | 0.02 | Orthogroups_2024-Update | |
Brara.B01837.1 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.02 | Orthogroups_2024-Update | |
GRMZM2G003514 | No alias | AGAMOUS-like 6 | 0.03 | Orthogroups_2024-Update | |
Glyma.05G163200 | No alias | K-box region and MADS-box transcription factor family protein | 0.05 | Orthogroups_2024-Update | |
Glyma.09G266400 | No alias | AGAMOUS-like 6 | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G026650.1 | No alias | MADS/AGL-type transcription factor | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g23910 | No alias | OsMADS25 - MADS-box family gene with MIKCc type-box, expressed | 0.02 | Orthogroups_2024-Update | |
LOC_Os09g32948 | No alias | OsMADS8 - MADS-box family gene with MIKCc type-box, expressed | 0.02 | Orthogroups_2024-Update | |
Potri.003G119700 | No alias | AGAMOUS-like 19 | 0.04 | Orthogroups_2024-Update | |
Potri.004G002400 | No alias | AGAMOUS-like 62 | 0.03 | Orthogroups_2024-Update | |
Potri.009G055700 | No alias | AGAMOUS-like 15 | 0.04 | Orthogroups_2024-Update | |
Potri.011G075800 | No alias | K-box region and MADS-box transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
Potri.012G125600 | No alias | K-box region and MADS-box transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
Potri.015G134800 | No alias | K-box region and MADS-box transcription factor family protein | 0.03 | Orthogroups_2024-Update | |
Pp1s209_130V6 | No alias | mads-box transcription factor | 0.02 | Orthogroups_2024-Update | |
Pp1s55_304V6 | No alias | agamous-like protein | 0.02 | Orthogroups_2024-Update | |
Seita.2G002300.1 | No alias | regulatory protein *(AP1/CAL/FUL) of floral meristem... | 0.02 | Orthogroups_2024-Update | |
Seita.9G490400.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.002G258000.1 | No alias | regulatory protein *(SEPALLATA) of floral meristem... | 0.02 | Orthogroups_2024-Update | |
Sopen01g037760 | No alias | SRF-type transcription factor (DNA-binding and... | 0.04 | Orthogroups_2024-Update | |
Sopen06g020070 | No alias | SRF-type transcription factor (DNA-binding and... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
MF | GO:0046983 | protein dimerization activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0009767 | photosynthetic electron transport chain | IEP | Predicted GO |
MF | GO:0010181 | FMN binding | IEP | Predicted GO |
MF | GO:0016168 | chlorophyll binding | IEP | Predicted GO |
BP | GO:0019684 | photosynthesis, light reaction | IEP | Predicted GO |
MF | GO:0046906 | tetrapyrrole binding | IEP | Predicted GO |
MF | GO:0047429 | nucleoside-triphosphate diphosphatase activity | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002100 | TF_MADSbox | 13 | 60 |
No external refs found! |