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  5. evm.model.tig00000190.50

evm.model.tig00000190.50


Description : (at5g52820 : 173.0) WD-40 repeat family protein / notchless protein, putative; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat, conserved site (InterPro:IPR019775), NLE (InterPro:IPR012972), WD40 repeat (InterPro:IPR001680), G-protein, beta subunit (InterPro:IPR001632), G-protein beta WD-40 repeat, region (InterPro:IPR020472), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G49660.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p25387|gblp_chlre : 149.0) Guanine nucleotide-binding protein subunit beta-like protein - Chlamydomonas reinhardtii & (reliability: 346.0) & (original description: no original description)


Gene families : OG_42_0003601 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003601_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000190.50
Cluster HCCA clusters: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
evm.model.tig00000042.142 No alias (at5g52820 : 167.0) WD-40 repeat family protein /... 0.04 Orthogroups_2024-Update
evm.model.tig00000523.37 No alias (at5g52820 : 177.0) WD-40 repeat family protein /... 0.03 Orthogroups_2024-Update
evm.model.tig00020660.10 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006471 protein ADP-ribosylation IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 713 744
IPR001680 WD40_repeat 874 910
IPR001680 WD40_repeat 1313 1345
IPR001680 WD40_repeat 923 952
IPR001680 WD40_repeat 1140 1176
IPR001680 WD40_repeat 832 868
IPR001680 WD40_repeat 1009 1036
IPR001680 WD40_repeat 1044 1092
IPR001680 WD40_repeat 1181 1218
IPR001680 WD40_repeat 789 826
IPR001680 WD40_repeat 1109 1134
IPR001680 WD40_repeat 752 784
No external refs found!