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  5. evm.model.tig00000241.74

evm.model.tig00000241.74


Description : (at5g62790 : 498.0) 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (DXR) catalyzes the first committed step of the 2-C-methyl-d-erythritol 4-phosphate pathway for isoprenoid biosynthesis. In Arabidopsis, DXR is encoded by a single-copy gene. Arabidopsis DXR is targeted to plastids and localizes into chloroplasts of leaf cells. DXR knockout or strongly silenced lines have a seedling lethal, albino phenotype. Transgenic, partially silenced lines expressing 35S:DXR have a variegated phenotype.; 1-deoxy-D-xylulose 5-phosphate reductoisomerase (DXR); CONTAINS InterPro DOMAIN/s: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal (InterPro:IPR013512), 1-deoxy-D-xylulose 5-phosphate reductoisomerase (InterPro:IPR003821), 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal (InterPro:IPR013644). & (q8w250|dxr_orysa : 491.0) 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplast precursor (EC 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) - Oryza sativa (Rice) & (reliability: 996.0) & (original description: no original description)


Gene families : OG_42_0005850 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000241.74
Cluster HCCA clusters: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Brara.I00705.1 No alias 1-deoxy-D-xylulose 5-phosphate reductase *(DXR) & EC_1.1... 0.01 Orthogroups_2024-Update
Potri.012G080900 No alias 1-deoxy-D-xylulose 5-phosphate reductoisomerase 0.01 Orthogroups_2024-Update
Solyc03g114340 No alias 1-deoxy-D-xylulose-5-phosphate reductoisomerase 0.02 Orthogroups_2024-Update
Sopen03g033440 No alias 1-deoxy-D-xylulose 5-phosphate reductoisomerase 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
MF GO:0070402 NADPH binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013512 DXP_reductoisomerase_N 102 233
IPR026877 DXPR_C 362 480
IPR013644 DXP_reductoisomerase_C 247 330
No external refs found!