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Description : 30S ribosomal protein S16, chloroplastic (AHRD V3.3 --* RR16_MORIN)
Gene families : OG_42_0009042 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc04g081330 | |
| Cluster | HCCA clusters: Cluster_36 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Bradi3g10200 | No alias | Function unknown | 0.04 | Orthogroups_2024-Update | |
| Cre07.g323600 | No alias | Function unknown | 0.02 | Orthogroups_2024-Update | |
| Kfl00272_0060 | kfl00272_0060_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g33290 | No alias | uncharacterized conserved membrane protein specific to... | 0.04 | Orthogroups_2024-Update | |
| Mp6g12170.1 | No alias | no hits & (original description: none) | 0.03 | Orthogroups_2024-Update | |
| Potri.006G069900 | No alias | Function unknown | 0.03 | Orthogroups_2024-Update | |
| Seita.1G122900.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.004G124400.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
| Sopen04g034950 | No alias | Protein of unknown function (DUF3119) | 0.1 | Orthogroups_2024-Update | |
| evm.model.contig_3404.6 | No alias | no hits & (original description: no original description) | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004852 | uroporphyrinogen-III synthase activity | IEP | Predicted GO |
| CC | GO:0005886 | plasma membrane | IEP | Predicted GO |
| BP | GO:0006694 | steroid biosynthetic process | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| BP | GO:0008202 | steroid metabolic process | IEP | Predicted GO |
| MF | GO:0008686 | 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | IEP | Predicted GO |
| MF | GO:0008987 | quinolinate synthetase A activity | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009435 | NAD biosynthetic process | IEP | Predicted GO |
| BP | GO:0010207 | photosystem II assembly | IEP | Predicted GO |
| BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Predicted GO |
| MF | GO:0016730 | oxidoreductase activity, acting on iron-sulfur proteins as donors | IEP | Predicted GO |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Predicted GO |
| MF | GO:0016836 | hydro-lyase activity | IEP | Predicted GO |
| BP | GO:0019674 | NAD metabolic process | IEP | Predicted GO |
| BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0051186 | cofactor metabolic process | IEP | Predicted GO |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051539 | 4 iron, 4 sulfur cluster binding | IEP | Predicted GO |
| MF | GO:0051540 | metal cluster binding | IEP | Predicted GO |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021467 | DUF3119 | 96 | 225 |
| No external refs found! |