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  5. Solyc04g082140

Solyc04g082140


Description : pectinesterase


Gene families : OG_42_0000592 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc04g082140
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
Bradi1g26470 No alias SKU5 similar 5 0.02 Orthogroups_2024-Update
Brara.F03913.1 No alias EC_1.10 oxidoreductase acting on diphenol or related... 0.04 Orthogroups_2024-Update
Glyma.14G223000 No alias SKU5 similar 5 0.03 Orthogroups_2024-Update
Sopen04g035770 No alias Multicopper oxidase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004379 glycylpeptide N-tetradecanoyltransferase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0019107 myristoyltransferase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
InterPro domains Description Start Stop
IPR011706 Cu-oxidase_2 401 512
IPR001117 Cu-oxidase 159 295
IPR011707 Cu-oxidase_3 33 146
No external refs found!