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  5. evm.model.tig00000448.22

evm.model.tig00000448.22


Description : (at1g71440 : 122.0) Encodes tubulin-folding cofactor E. Mutant embryos consist of one or a few grossly enlarged cells, surrounded by an endosperm that fails to cellularize and contains a few big nuclei.; PFIFFERLING (PFI); INVOLVED IN: tubulin complex assembly, embryo development ending in seed dormancy, cytokinesis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytoskeleton-associated protein, CAP-Gly (InterPro:IPR000938); Has 7270 Blast hits to 6366 proteins in 489 species: Archae - 4; Bacteria - 1949; Metazoa - 3435; Fungi - 492; Plants - 819; Viruses - 0; Other Eukaryotes - 571 (source: NCBI BLink). & (reliability: 244.0) & (original description: no original description)


Gene families : OG_42_0005880 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005880_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000448.22
Cluster HCCA clusters: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Mp7g05910.1 No alias TFC-E cofactor of post-CCT Tubulin folding pathway 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 459 545
IPR000938 CAP-Gly_domain 10 78
No external refs found!