1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. evm.model.tig00000478.34

evm.model.tig00000478.34


Description : no hits & (original description: no original description)


Gene families : OG_42_0011481 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011481_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000478.34
Cluster HCCA clusters: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
228785 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 168 196
IPR002885 Pentatricopeptide_repeat 99 148
IPR002885 Pentatricopeptide_repeat 627 685
IPR033443 PPR_long 491 585
IPR002885 Pentatricopeptide_repeat 60 84
IPR002885 Pentatricopeptide_repeat 209 235
IPR002885 Pentatricopeptide_repeat 745 767
No external refs found!