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  5. evm.model.tig00000663.22

evm.model.tig00000663.22


Description : no hits & (original description: no original description)


Gene families : OG_42_0001108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000663.22
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
139717 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.01 Orthogroups_2024-Update
At1g10390 No alias Nuclear pore complex protein NUP98A... 0.01 Orthogroups_2024-Update
At1g80680 No alias Nuclear pore complex protein NUP96... 0.03 Orthogroups_2024-Update
Brara.G02046.1 No alias scaffold nucleoporin of nuclear pore complex 0.01 Orthogroups_2024-Update
Cre02.g086887 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.02 Orthogroups_2024-Update
Glyma.12G235000 No alias Nucleoporin autopeptidase 0.01 Orthogroups_2024-Update
Glyma.13G264100 No alias Nucleoporin autopeptidase 0.03 Orthogroups_2024-Update
MA_10434126g0020 No alias (at1g80680 : 731.0) Mutant has early-flowering... 0.01 Orthogroups_2024-Update
PSME_00023234-RA No alias (at1g10390 : 778.0) Nucleoporin autopeptidase; FUNCTIONS... 0.06 Orthogroups_2024-Update
Pp1s315_38V6 No alias nucleoporin 98 0.01 Orthogroups_2024-Update
Seita.7G335200.1 No alias nucleoporin of nuclear pore complex *(NUP98) 0.02 Orthogroups_2024-Update
Seita.8G000600.1 No alias nucleoporin of nuclear pore complex *(NUP98) 0.03 Orthogroups_2024-Update
Seita.9G523200.1 No alias scaffold nucleoporin of nuclear pore complex 0.01 Orthogroups_2024-Update
Sopen03g036030 No alias Nuclear protein 96 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA InterProScan predictions
BP GO:0006913 nucleocytoplasmic transport IEA InterProScan predictions
MF GO:0017056 structural constituent of nuclear pore IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
CC GO:0000124 SAGA complex IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
CC GO:0070461 SAGA-type complex IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR025574 Nucleoporin_FG_rpt 363 394
IPR025574 Nucleoporin_FG_rpt 2 35
IPR025574 Nucleoporin_FG_rpt 253 301
IPR025574 Nucleoporin_FG_rpt 494 564
IPR007230 Peptidase_S59 790 887
IPR021967 Nup96 1224 1299
No external refs found!