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  5. evm.model.tig00000692.65

evm.model.tig00000692.65


Description : (q6f332|calm2_orysa : 213.0) Calmodulin-2 (CaM-2) - Oryza sativa (Rice) & (at5g37780 : 211.0) encodes a calmodulin that is involved in thigmomorphogenesis. Gene expression is rapidly induced upon a variety of abiotic stimuli, including water spray, subirrigation, wind, touch, wounding, or darkness.; calmodulin 1 (CAM1); CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: calmodulin 4 (TAIR:AT1G66410.1); Has 29914 Blast hits to 22079 proteins in 1723 species: Archae - 3; Bacteria - 127; Metazoa - 13080; Fungi - 6590; Plants - 6083; Viruses - 0; Other Eukaryotes - 4031 (source: NCBI BLink). & (reliability: 422.0) & (original description: no original description)


Gene families : OG_42_0000315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000692.65
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
A4A49_63715 No alias calmodulin-7 0.01 Orthogroups_2024-Update
At1g66410 No alias Calmodulin 4 [Source:UniProtKB/TrEMBL;Acc:F4IEU4] 0.01 Orthogroups_2024-Update
Brara.A02692.1 No alias calcium sensor *(CML) 0.01 Orthogroups_2024-Update
Brara.B00936.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.01 Orthogroups_2024-Update
Brara.I03906.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.02 Orthogroups_2024-Update
Cre03.g178150 No alias calmodulin 6 0.02 Orthogroups_2024-Update
Cre03.g178350 No alias calmodulin 4 0.05 Orthogroups_2024-Update
Glyma.14G040600 No alias calmodulin 5 0.02 Orthogroups_2024-Update
HORVU3Hr1G038010.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.01 Orthogroups_2024-Update
MA_15211g0010 No alias (p17928|calm_medsa : 291.0) Calmodulin (CaM) - Medicago... 0.02 Orthogroups_2024-Update
Seita.5G048500.1 No alias calcium sensor *(CML) & calcium sensor *(CaM) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004618 phosphoglycerate kinase activity IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0030991 intraciliary transport particle A IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 14 43
IPR002048 EF_hand_dom 86 147
No external refs found!