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  5. evm.model.tig00000754.29

evm.model.tig00000754.29


Description : (p31022|rab7_pea : 311.0) Ras-related protein Rab7 - Pisum sativum (Garden pea) & (at3g16100 : 303.0) RAB GTPase homolog G3C (RABG3c); FUNCTIONS IN: GTP binding; INVOLVED IN: protein transport, small GTPase mediated signal transduction; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Small GTPase (InterPro:IPR020851), Ras (InterPro:IPR013753), Ras small GTPase, Rab type (InterPro:IPR003579); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog G3D (TAIR:AT1G52280.1); Has 25544 Blast hits to 25522 proteins in 774 species: Archae - 27; Bacteria - 219; Metazoa - 13379; Fungi - 3488; Plants - 2822; Viruses - 20; Other Eukaryotes - 5589 (source: NCBI BLink). & (reliability: 606.0) & (original description: no original description)


Gene families : OG_42_0001031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000754.29
Cluster HCCA clusters: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
PSME_00002763-RA No alias (q9xer8|rab7_goshi : 310.0) Ras-related protein Rab7 -... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003352 regulation of cilium movement IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005672 transcription factor TFIIA complex IEP Predicted GO
BP GO:0006333 chromatin assembly or disassembly IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0032879 regulation of localization IEP Predicted GO
BP GO:0032886 regulation of microtubule-based process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0051270 regulation of cellular component movement IEP Predicted GO
BP GO:0060632 regulation of microtubule-based movement IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 12 177
No external refs found!