evm.model.tig00000852.23

Description : (at3g43300 : 543.0) AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome.; HOPM interactor 7 (ATMIN7); CONTAINS InterPro DOMAIN/s: SEC7-like (InterPro:IPR000904), Armadillo-type fold (InterPro:IPR016024), Protein of unknown function DUF1981, SEC7 associated (InterPro:IPR015403); BEST Arabidopsis thaliana protein match is: SEC7-like guanine nucleotide exchange family protein (TAIR:AT1G01960.1). & (reliability: 1086.0) & (original description: no original description)

Gene families : OG_42_0000974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000974_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Cyanophora release: evm.model.tig00000852.23
Cluster	HCCA clusters: Cluster_61

Target	Alias	Description	ECC score	Gene Family Method
At1g01960	No alias	Brefeldin A-inhibited guanine nucleotide-exchange...	0.01	Orthogroups_2024-Update
At3g60860	No alias	Brefeldin A-inhibited guanine nucleotide-exchange...	0.01	Orthogroups_2024-Update
Bradi1g24597	No alias	HOPM interactor 7	0.03	Orthogroups_2024-Update
Bradi1g35770	No alias	SEC7-like guanine nucleotide exchange family protein	0.03	Orthogroups_2024-Update
Bradi1g68180	No alias	SEC7-like guanine nucleotide exchange family protein	0.03	Orthogroups_2024-Update
GRMZM2G335287	No alias	HOPM interactor 7	0.01	Orthogroups_2024-Update
Glyma.02G312200	No alias	SEC7-like guanine nucleotide exchange family protein	0.05	Orthogroups_2024-Update
Glyma.03G022900	No alias	SEC7-like guanine nucleotide exchange family protein	0.01	Orthogroups_2024-Update
Glyma.09G268400	No alias	SEC7-like guanine nucleotide exchange family protein	0.04	Orthogroups_2024-Update
Glyma.13G115800	No alias	HOPM interactor 7	0.04	Orthogroups_2024-Update
Glyma.14G000300	No alias	SEC7-like guanine nucleotide exchange family protein	0.01	Orthogroups_2024-Update
Glyma.17G044000	No alias	HOPM interactor 7	0.03	Orthogroups_2024-Update
HORVU2Hr1G040020.4	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG)	0.03	Orthogroups_2024-Update
HORVU4Hr1G063180.2	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG)	0.02	Orthogroups_2024-Update
Kfl00174_0120	kfl00174_0120_v1.1	(at3g43300 : 1318.0) AtMIN7 is an immunity associated...	0.03	Orthogroups_2024-Update
Kfl00714_0050	kfl00714_0050_v1.1	(at3g60860 : 1621.0) SEC7-like guanine nucleotide...	0.04	Orthogroups_2024-Update
LOC_Os03g14260	No alias	guanine nucleotide exchange family protein, putative, expressed	0.01	Orthogroups_2024-Update
MA_20138g0010	No alias	(at3g43300 : 1407.0) AtMIN7 is an immunity associated...	0.04	Orthogroups_2024-Update
MA_20563g0010	No alias	(at3g60860 : 849.0) SEC7-like guanine nucleotide...	0.03	Orthogroups_2024-Update
Mp8g18220.1	No alias	BIG-type ARF-GTPase guanyl-nucleotide exchange factor	0.04	Orthogroups_2024-Update
PSME_00023222-RA	No alias	(at3g43300 : 301.0) AtMIN7 is an immunity associated...	0.01	Orthogroups_2024-Update
PSME_00029664-RA	No alias	(at3g43300 : 597.0) AtMIN7 is an immunity associated...	0.01	Orthogroups_2024-Update
PSME_00031685-RA	No alias	(at3g60860 : 2385.0) SEC7-like guanine nucleotide...	0.02	Orthogroups_2024-Update
Pp1s116_43V6	No alias	No description available	0.01	Orthogroups_2024-Update
Pp1s264_74V6	No alias	T4C21.270; guanine nucleotide exchange family protein...	0.01	Orthogroups_2024-Update
Seita.2G354300.1	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG)	0.03	Orthogroups_2024-Update
Seita.9G470100.1	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG)	0.02	Orthogroups_2024-Update
Sobic.001G437400.1	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG)	0.03	Orthogroups_2024-Update
Sobic.002G340900.1	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG)	0.03	Orthogroups_2024-Update
Sobic.004G077300.1	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG)	0.01	Orthogroups_2024-Update
Sobic.010G195000.1	No alias	ARF-GTPase guanyl-nucleotide exchange factor *(BIG)	0.03	Orthogroups_2024-Update
Solyc01g112350	No alias	Brefeldin A-inhibited guanine nucleotide-exchange...	0.02	Orthogroups_2024-Update
Solyc12g017830	No alias	GATA transcription factor 19 (AHRD V3.3 --* AT4G36620.1)	0.01	Orthogroups_2024-Update
Sopen12g008630	No alias	Sec7 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005085	guanyl-nucleotide exchange factor activity	None	Extended
MF	GO:0005086	ARF guanyl-nucleotide exchange factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009966	regulation of signal transduction	None	Extended
BP	GO:0010646	regulation of cell communication	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
BP	GO:0023051	regulation of signaling	None	Extended
BP	GO:0032012	regulation of ARF protein signal transduction	IEA	InterProScan predictions
BP	GO:0046578	regulation of Ras protein signal transduction	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051056	regulation of small GTPase mediated signal transduction	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
BP	GO:1902531	regulation of intracellular signal transduction	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Predicted GO
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	Predicted GO
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	Predicted GO
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0003682	chromatin binding	IEP	Predicted GO
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0003777	microtubule motor activity	IEP	Predicted GO
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Predicted GO
MF	GO:0004819	glutamine-tRNA ligase activity	IEP	Predicted GO
MF	GO:0005524	ATP binding	IEP	Predicted GO
CC	GO:0005575	cellular_component	IEP	Predicted GO
CC	GO:0005801	cis-Golgi network	IEP	Predicted GO
BP	GO:0006338	chromatin remodeling	IEP	Predicted GO
BP	GO:0006351	transcription, DNA-templated	IEP	Predicted GO
BP	GO:0006399	tRNA metabolic process	IEP	Predicted GO
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Predicted GO
BP	GO:0006425	glutaminyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
BP	GO:0006807	nitrogen compound metabolic process	IEP	Predicted GO
BP	GO:0006810	transport	IEP	Predicted GO
BP	GO:0006886	intracellular protein transport	IEP	Predicted GO
BP	GO:0006928	movement of cell or subcellular component	IEP	Predicted GO
BP	GO:0007018	microtubule-based movement	IEP	Predicted GO
MF	GO:0008017	microtubule binding	IEP	Predicted GO
MF	GO:0008092	cytoskeletal protein binding	IEP	Predicted GO
BP	GO:0008104	protein localization	IEP	Predicted GO
MF	GO:0008144	drug binding	IEP	Predicted GO
MF	GO:0008536	Ran GTPase binding	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
BP	GO:0015031	protein transport	IEP	Predicted GO
MF	GO:0015631	tubulin binding	IEP	Predicted GO
BP	GO:0015833	peptide transport	IEP	Predicted GO
BP	GO:0016070	RNA metabolic process	IEP	Predicted GO
BP	GO:0016192	vesicle-mediated transport	IEP	Predicted GO
MF	GO:0016301	kinase activity	IEP	Predicted GO
BP	GO:0016310	phosphorylation	IEP	Predicted GO
MF	GO:0016462	pyrophosphatase activity	IEP	Predicted GO
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Predicted GO
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Predicted GO
MF	GO:0016779	nucleotidyltransferase activity	IEP	Predicted GO
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Predicted GO
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Predicted GO
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Predicted GO
MF	GO:0017016	Ras GTPase binding	IEP	Predicted GO
MF	GO:0017076	purine nucleotide binding	IEP	Predicted GO
MF	GO:0017111	nucleoside-triphosphatase activity	IEP	Predicted GO
CC	GO:0030117	membrane coat	IEP	Predicted GO
MF	GO:0030554	adenyl nucleotide binding	IEP	Predicted GO
MF	GO:0031267	small GTPase binding	IEP	Predicted GO
MF	GO:0031491	nucleosome binding	IEP	Predicted GO
MF	GO:0032553	ribonucleotide binding	IEP	Predicted GO
MF	GO:0032555	purine ribonucleotide binding	IEP	Predicted GO
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Predicted GO
BP	GO:0032774	RNA biosynthetic process	IEP	Predicted GO
BP	GO:0033036	macromolecule localization	IEP	Predicted GO
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Predicted GO
MF	GO:0036094	small molecule binding	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0042886	amide transport	IEP	Predicted GO
BP	GO:0043038	amino acid activation	IEP	Predicted GO
BP	GO:0043039	tRNA aminoacylation	IEP	Predicted GO
BP	GO:0043044	ATP-dependent chromatin remodeling	IEP	Predicted GO
MF	GO:0043167	ion binding	IEP	Predicted GO
MF	GO:0043168	anion binding	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
CC	GO:0044424	intracellular part	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
CC	GO:0044431	Golgi apparatus part	IEP	Predicted GO
CC	GO:0044444	cytoplasmic part	IEP	Predicted GO
CC	GO:0044464	cell part	IEP	Predicted GO
MF	GO:0044877	protein-containing complex binding	IEP	Predicted GO
BP	GO:0045184	establishment of protein localization	IEP	Predicted GO
BP	GO:0046907	intracellular transport	IEP	Predicted GO
BP	GO:0051179	localization	IEP	Predicted GO
BP	GO:0051234	establishment of localization	IEP	Predicted GO
BP	GO:0051641	cellular localization	IEP	Predicted GO
BP	GO:0051649	establishment of localization in cell	IEP	Predicted GO
BP	GO:0071702	organic substance transport	IEP	Predicted GO
BP	GO:0071705	nitrogen compound transport	IEP	Predicted GO
BP	GO:0090304	nucleic acid metabolic process	IEP	Predicted GO
MF	GO:0097159	organic cyclic compound binding	IEP	Predicted GO
MF	GO:0097367	carbohydrate derivative binding	IEP	Predicted GO
BP	GO:0097659	nucleic acid-templated transcription	IEP	Predicted GO
MF	GO:0097747	RNA polymerase activity	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Predicted GO
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Predicted GO
MF	GO:1901265	nucleoside phosphate binding	IEP	Predicted GO
MF	GO:1901363	heterocyclic compound binding	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR015403	Sec7_C	1045	1075
IPR032691	Sec7_N	315	470
IPR000904	Sec7_dom	534	693
IPR032629	DCB_dom	15	187

External Links

No external refs found!

evm.model.tig00000852.23

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation