Coexpression cluster: Cluster_61 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 33.55% (52/155) 1.29 0.0 0.0
GO:0030554 adenyl nucleotide binding 14.84% (23/155) 2.16 0.0 0.0
GO:0032559 adenyl ribonucleotide binding 14.84% (23/155) 2.16 0.0 0.0
GO:0005524 ATP binding 14.84% (23/155) 2.17 0.0 0.0
GO:1901363 heterocyclic compound binding 21.94% (34/155) 1.66 0.0 0.0
GO:0097159 organic cyclic compound binding 21.94% (34/155) 1.66 0.0 0.0
GO:0008144 drug binding 14.84% (23/155) 2.1 0.0 0.0
GO:0017076 purine nucleotide binding 15.48% (24/155) 2.0 0.0 0.0
GO:0035639 purine ribonucleoside triphosphate binding 15.48% (24/155) 2.02 0.0 0.0
GO:0032555 purine ribonucleotide binding 15.48% (24/155) 2.01 0.0 0.0
GO:0000166 nucleotide binding 16.13% (25/155) 1.9 0.0 0.0
GO:1901265 nucleoside phosphate binding 16.13% (25/155) 1.9 0.0 0.0
GO:0043168 anion binding 16.13% (25/155) 1.91 0.0 0.0
GO:0097367 carbohydrate derivative binding 15.48% (24/155) 1.97 0.0 0.0
GO:0032553 ribonucleotide binding 15.48% (24/155) 1.97 0.0 0.0
GO:0036094 small molecule binding 16.13% (25/155) 1.85 0.0 0.0
GO:0030117 membrane coat 3.23% (5/155) 5.73 0.0 0.0
GO:0043167 ion binding 18.06% (28/155) 1.59 0.0 2e-06
GO:0006886 intracellular protein transport 3.87% (6/155) 4.29 1e-06 9e-06
GO:0016192 vesicle-mediated transport 3.87% (6/155) 4.23 1e-06 1.1e-05
GO:0051649 establishment of localization in cell 3.87% (6/155) 3.97 2e-06 2.6e-05
GO:0042886 amide transport 3.87% (6/155) 3.97 2e-06 2.6e-05
GO:0046907 intracellular transport 3.87% (6/155) 3.97 2e-06 2.6e-05
GO:0015031 protein transport 3.87% (6/155) 3.97 2e-06 2.6e-05
GO:0015833 peptide transport 3.87% (6/155) 3.97 2e-06 2.6e-05
GO:0045184 establishment of protein localization 3.87% (6/155) 3.92 3e-06 3e-05
GO:0003674 molecular_function 38.06% (59/155) 0.82 2e-06 3.1e-05
GO:0033036 macromolecule localization 3.87% (6/155) 3.9 3e-06 3.1e-05
GO:0008104 protein localization 3.87% (6/155) 3.9 3e-06 3.1e-05
GO:0051641 cellular localization 3.87% (6/155) 3.75 6e-06 5.5e-05
GO:0071705 nitrogen compound transport 3.87% (6/155) 3.58 1.1e-05 0.000106
GO:0098796 membrane protein complex 3.87% (6/155) 3.51 1.5e-05 0.000136
GO:0071702 organic substance transport 3.87% (6/155) 3.44 2e-05 0.000173
GO:0036211 protein modification process 7.74% (12/155) 2.08 3e-05 0.000248
GO:0006464 cellular protein modification process 7.74% (12/155) 2.08 3e-05 0.000248
GO:0043412 macromolecule modification 7.74% (12/155) 1.99 5.7e-05 0.000456
GO:0044260 cellular macromolecule metabolic process 10.32% (16/155) 1.57 0.000107 0.000842
GO:0043170 macromolecule metabolic process 12.9% (20/155) 1.35 0.000118 0.000902
GO:0044267 cellular protein metabolic process 7.74% (12/155) 1.82 0.000164 0.001222
GO:0032012 regulation of ARF protein signal transduction 1.29% (2/155) 6.32 0.000233 0.00157
GO:0046578 regulation of Ras protein signal transduction 1.29% (2/155) 6.32 0.000233 0.00157
GO:0005085 guanyl-nucleotide exchange factor activity 1.29% (2/155) 6.32 0.000233 0.00157
GO:0005086 ARF guanyl-nucleotide exchange factor activity 1.29% (2/155) 6.32 0.000233 0.00157
GO:0006810 transport 7.1% (11/155) 1.84 0.000274 0.001806
GO:0051234 establishment of localization 7.1% (11/155) 1.84 0.000284 0.001828
GO:0051179 localization 7.1% (11/155) 1.82 0.000309 0.001948
GO:0006397 mRNA processing 1.94% (3/155) 4.44 0.000342 0.002109
GO:0051056 regulation of small GTPase mediated signal transduction 1.29% (2/155) 5.99 0.000386 0.002287
GO:1902531 regulation of intracellular signal transduction 1.29% (2/155) 5.99 0.000386 0.002287
GO:0008150 biological_process 23.87% (37/155) 0.81 0.000415 0.002406
GO:0006468 protein phosphorylation 5.16% (8/155) 2.14 0.000509 0.002893
GO:0005976 polysaccharide metabolic process 1.29% (2/155) 5.73 0.000577 0.0031
GO:0070646 protein modification by small protein removal 1.94% (3/155) 4.2 0.000567 0.0031
GO:0016579 protein deubiquitination 1.94% (3/155) 4.2 0.000567 0.0031
GO:0016071 mRNA metabolic process 1.94% (3/155) 4.15 0.000635 0.003286
GO:0019899 enzyme binding 1.94% (3/155) 4.15 0.000635 0.003286
GO:0005575 cellular_component 11.61% (18/155) 1.22 0.000737 0.003749
GO:0000398 mRNA splicing, via spliceosome 1.29% (2/155) 5.51 0.000805 0.00389
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.29% (2/155) 5.51 0.000805 0.00389
GO:0000375 RNA splicing, via transesterification reactions 1.29% (2/155) 5.51 0.000805 0.00389
GO:0019783 ubiquitin-like protein-specific protease activity 1.94% (3/155) 3.99 0.000869 0.003999
GO:0036459 thiol-dependent ubiquitinyl hydrolase activity 1.94% (3/155) 3.99 0.000869 0.003999
GO:0101005 ubiquitinyl hydrolase activity 1.94% (3/155) 3.99 0.000869 0.003999
GO:0044238 primary metabolic process 14.19% (22/155) 1.03 0.001078 0.004341
GO:0023051 regulation of signaling 1.29% (2/155) 5.32 0.001069 0.004364
GO:0010646 regulation of cell communication 1.29% (2/155) 5.32 0.001069 0.004364
GO:0030120 vesicle coat 1.29% (2/155) 5.32 0.001069 0.004364
GO:0009966 regulation of signal transduction 1.29% (2/155) 5.32 0.001069 0.004364
GO:0004672 protein kinase activity 5.81% (9/155) 1.85 0.000969 0.004392
GO:0044425 membrane part 5.81% (9/155) 1.84 0.000986 0.0044
GO:0019538 protein metabolic process 8.39% (13/155) 1.45 0.001028 0.004448
GO:0016772 transferase activity, transferring phosphorus-containing groups 7.1% (11/155) 1.61 0.001018 0.004473
GO:0016310 phosphorylation 5.16% (8/155) 1.94 0.001243 0.004939
GO:0032991 protein-containing complex 5.81% (9/155) 1.77 0.001383 0.00542
GO:0070647 protein modification by small protein conjugation or removal 1.94% (3/155) 3.69 0.00161 0.006225
GO:0048583 regulation of response to stimulus 1.29% (2/155) 4.99 0.001703 0.006499
GO:0044237 cellular metabolic process 12.9% (20/155) 1.04 0.001784 0.00672
GO:0071704 organic substance metabolic process 14.19% (22/155) 0.97 0.001819 0.006762
GO:0003676 nucleic acid binding 7.74% (12/155) 1.42 0.001853 0.006802
GO:0016773 phosphotransferase activity, alcohol group as acceptor 5.81% (9/155) 1.69 0.001989 0.007208
GO:0044433 cytoplasmic vesicle part 1.29% (2/155) 4.86 0.002073 0.007422
GO:0016301 kinase activity 5.81% (9/155) 1.65 0.002415 0.00854
GO:0140096 catalytic activity, acting on a protein 7.74% (12/155) 1.35 0.002774 0.009691
GO:0008380 RNA splicing 1.29% (2/155) 4.62 0.002916 0.010067
GO:1901564 organonitrogen compound metabolic process 9.03% (14/155) 1.17 0.003928 0.013401
GO:0016740 transferase activity 8.39% (13/155) 1.22 0.003988 0.013447
GO:0016459 myosin complex 1.29% (2/155) 4.32 0.004431 0.014602
GO:0051020 GTPase binding 1.29% (2/155) 4.32 0.004431 0.014602
GO:0006807 nitrogen compound metabolic process 12.26% (19/155) 0.94 0.004748 0.015471
GO:0017111 nucleoside-triphosphatase activity 4.52% (7/155) 1.75 0.00509 0.0164
GO:0016462 pyrophosphatase activity 4.52% (7/155) 1.71 0.00587 0.018705
GO:0016817 hydrolase activity, acting on acid anhydrides 4.52% (7/155) 1.69 0.00634 0.018955
GO:0030623 U5 snRNA binding 0.65% (1/155) 7.32 0.006275 0.018955
GO:0017069 snRNA binding 0.65% (1/155) 7.32 0.006275 0.018955
GO:0017070 U6 snRNA binding 0.65% (1/155) 7.32 0.006275 0.018955
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 4.52% (7/155) 1.7 0.006149 0.019173
GO:0044464 cell part 6.45% (10/155) 1.36 0.006083 0.019176
GO:0005515 protein binding 10.97% (17/155) 0.94 0.007395 0.021884
GO:0044444 cytoplasmic part 3.23% (5/155) 2.0 0.008521 0.024962
GO:0006793 phosphorus metabolic process 5.81% (9/155) 1.35 0.009423 0.027057
GO:0006796 phosphate-containing compound metabolic process 5.81% (9/155) 1.35 0.009423 0.027057
GO:0008234 cysteine-type peptidase activity 1.94% (3/155) 2.73 0.010535 0.029663
GO:0044424 intracellular part 5.81% (9/155) 1.32 0.010488 0.029818
GO:0016160 amylase activity 0.65% (1/155) 6.32 0.012511 0.033593
GO:0009341 beta-galactosidase complex 0.65% (1/155) 6.32 0.012511 0.033593
GO:0016161 beta-amylase activity 0.65% (1/155) 6.32 0.012511 0.033593
GO:0000272 polysaccharide catabolic process 0.65% (1/155) 6.32 0.012511 0.033593
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 1.29% (2/155) 3.56 0.012389 0.034547
GO:0034062 5'-3' RNA polymerase activity 1.29% (2/155) 3.41 0.015167 0.039987
GO:0097747 RNA polymerase activity 1.29% (2/155) 3.41 0.015167 0.039987
GO:0015969 guanosine tetraphosphate metabolic process 0.65% (1/155) 5.73 0.018707 0.047175
GO:0034035 purine ribonucleoside bisphosphate metabolic process 0.65% (1/155) 5.73 0.018707 0.047175
GO:0015925 galactosidase activity 0.65% (1/155) 5.73 0.018707 0.047175
GO:0004565 beta-galactosidase activity 0.65% (1/155) 5.73 0.018707 0.047175
GO:0030126 COPI vesicle coat 0.65% (1/155) 5.73 0.018707 0.047175
GO:0008152 metabolic process 14.19% (22/155) 0.67 0.0196 0.049001
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_33 0.019 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_229 0.025 Orthogroups_2024-Update Compare
Solanum lycopersicum HCCA clusters Cluster_231 0.023 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_175 0.027 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_20 0.028 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_35 0.027 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_67 0.029 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_97 0.024 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_108 0.024 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_32 0.022 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_72 0.033 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_160 0.021 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_37 0.041 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_64 0.02 Orthogroups_2024-Update Compare
Klebsormidium nitens HCCA clusters Cluster_67 0.032 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_59 0.036 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_137 0.04 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_205 0.026 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_245 0.032 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_247 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_260 0.025 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_6 0.023 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_58 0.032 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_162 0.029 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_86 0.041 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_106 0.02 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_126 0.032 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_201 0.024 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_215 0.041 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_222 0.025 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_229 0.03 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_1 0.025 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_7 0.058 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_75 0.033 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_112 0.034 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_155 0.024 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_188 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_198 0.026 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_242 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_18 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_98 0.045 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_169 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_189 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_286 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_317 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_323 0.033 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_377 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_443 0.04 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_466 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_481 0.024 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_484 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_504 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_9 0.025 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_133 0.025 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_74 0.02 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_91 0.026 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_74 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_100 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_106 0.02 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0034 0.019 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0110 0.03 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0154 0.039 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_20 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_83 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_142 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_257 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_380 0.021 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_50 0.024 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_87 0.02 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_107 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_5 0.022 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_47 0.03 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_65 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_110 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_135 0.021 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_137 0.023 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_58 0.03 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_60 0.033 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_76 0.037 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_122 0.041 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_255 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_32 0.021 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_74 0.027 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_115 0.022 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_131 0.02 Orthogroups_2024-Update Compare
Sequences (155) (download table)

InterPro Domains

GO Terms

Family Terms