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  5. evm.model.tig00000889.14

evm.model.tig00000889.14


Description : (at3g11240 : 197.0) Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.; arginine-tRNA protein transferase 2 (ATE2); FUNCTIONS IN: arginyltransferase activity; INVOLVED IN: regulation of seed germination, regulation of lipid catabolic process, protein arginylation, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 1 (TAIR:AT5G05700.1); Has 2270 Blast hits to 2031 proteins in 783 species: Archae - 0; Bacteria - 1438; Metazoa - 213; Fungi - 241; Plants - 48; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink). & (reliability: 394.0) & (original description: no original description)


Gene families : OG_42_0005170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00000889.14
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
At5g05700 No alias Arginyl-tRNA--protein transferase 1... 0.01 Orthogroups_2024-Update
Cre13.g580600 No alias arginine-tRNA protein transferase 1 0.01 Orthogroups_2024-Update
Glyma.18G028600 No alias arginine-tRNA protein transferase 1 0.01 Orthogroups_2024-Update
Mp7g19210.1 No alias arginyl-tRNA-protein transferase (ATE) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004057 arginyltransferase activity IEA InterProScan predictions
BP GO:0016598 protein arginylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0032947 protein-containing complex scaffold activity IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
InterPro domains Description Start Stop
IPR007472 N-end_Aminoacyl_Trfase_C 329 477
IPR007471 N-end_Aminoacyl_Trfase_N 16 88
No external refs found!