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Description : RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1)
Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc05g008840 | |
| Cluster | HCCA clusters: Cluster_120 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| A4A49_05648 | No alias | putative e3 ubiquitin-protein ligase hip1 | 0.03 | Orthogroups_2024-Update | |
| At4g31450 | No alias | AT4g31450/F3L17_20 [Source:UniProtKB/TrEMBL;Acc:Q944Q9] | 0.03 | Orthogroups_2024-Update | |
| Brara.C00432.1 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G061663 | No alias | RING/U-box superfamily protein | 0.03 | Orthogroups_2024-Update | |
| HORVU3Hr1G018800.2 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.02 | Orthogroups_2024-Update | |
| LOC_Os05g47670 | No alias | zinc finger, C3HC4 type domain containing protein, expressed | 0.02 | Orthogroups_2024-Update | |
| Seita.5G113000.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.7G262700.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.03 | Orthogroups_2024-Update | |
| Seita.7G272600.1 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase | 0.04 | Orthogroups_2024-Update | |
| Solyc03g118840 | No alias | RING/U-box superfamily protein (AHRD V3.3 *** AT1G73760.1) | 0.02 | Orthogroups_2024-Update | |
| Sopen05g004600 | No alias | Ring finger domain | 0.08 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Predicted GO |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Predicted GO |
| BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
| BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Predicted GO |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Predicted GO |
| BP | GO:0010468 | regulation of gene expression | IEP | Predicted GO |
| BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0019222 | regulation of metabolic process | IEP | Predicted GO |
| BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Predicted GO |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Predicted GO |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
| BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
| BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Predicted GO |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Predicted GO |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Predicted GO |
| MF | GO:0140110 | transcription regulator activity | IEP | Predicted GO |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Predicted GO |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Predicted GO |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |