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  5. evm.model.tig00001071.14

evm.model.tig00001071.14


Description : (at3g63520 : 102.0) Encodes a protein with 9-<i>cis</i>-epoxycarotenoid dioxygenase activity. The enzyme was shown to act on a variety of carotenoid including &#946;-carotene, lutein, zeaxanthin, and all-<i>trans</i>-violaxanthin. When those compounds are used as substrates, the major reaction product detected is a C14 dialdehyde: 4,9-dimethyldodeca-2,4,6,8,10-pentaene-1,12-dial. The enzyme did not cleave as efficiently carotenoids containing 9-<i>cis</i>-double or allenic bonds.; carotenoid cleavage dioxygenase 1 (CCD1); FUNCTIONS IN: 9-cis-epoxycarotenoid dioxygenase activity; INVOLVED IN: response to water deprivation, carotene catabolic process, xanthophyll catabolic process, carotenoid catabolic process; LOCATED IN: plasma membrane, vacuole, cytoplasm; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294); BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 4 (TAIR:AT4G19170.1); Has 2926 Blast hits to 2896 proteins in 500 species: Archae - 16; Bacteria - 808; Metazoa - 317; Fungi - 194; Plants - 866; Viruses - 0; Other Eukaryotes - 725 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)


Gene families : OG_42_0000424 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000424_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00001071.14
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
272067 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
A4A49_34874 No alias putative carotenoid cleavage dioxygenase 4, chloroplastic 0.01 Orthogroups_2024-Update
At4g19170 No alias Probable carotenoid cleavage dioxygenase 4,... 0.01 Orthogroups_2024-Update
Bradi4g00330 No alias carotenoid cleavage dioxygenase 1 0.01 Orthogroups_2024-Update
Brara.A01020.1 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.02 Orthogroups_2024-Update
Brara.A03189.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.01 Orthogroups_2024-Update
Brara.C03527.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.03 Orthogroups_2024-Update
Brara.D00005.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.02 Orthogroups_2024-Update
Brara.E02677.1 No alias EC_1.13 oxidoreductase acting on single donor with... 0.01 Orthogroups_2024-Update
GRMZM2G057243 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
GRMZM2G110192 No alias nine-cis-epoxycarotenoid dioxygenase 4 0.02 Orthogroups_2024-Update
Glyma.12G236650 No alias carotenoid cleavage dioxygenase 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G000320.2 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.03 Orthogroups_2024-Update
HORVU6Hr1G068720.4 No alias carotenoid cleavage dioxygenase *(CCD4) & EC_1.13... 0.01 Orthogroups_2024-Update
PSME_00056181-RA No alias (at3g14440 : 662.0) Encodes ... 0.01 Orthogroups_2024-Update
Pp1s118_231V6 No alias MAA21.150; 9-cis-epoxycarotenoid dioxygenase /... 0.02 Orthogroups_2024-Update
Pp1s12_317V6 No alias carotenoid cleavage dioxygenase 1 0.02 Orthogroups_2024-Update
Pp1s132_26V6 No alias carotenoid cleavage dioxygenase 0.01 Orthogroups_2024-Update
Seita.3G408300.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.03 Orthogroups_2024-Update
Sobic.001G509200.1 No alias carotenoid cleavage dioxygenase *(CCD1) & EC_1.13... 0.02 Orthogroups_2024-Update
Solyc01g087260 No alias carotenoid cleavage dioxygenase 1B 0.01 Orthogroups_2024-Update
Solyc08g075490 No alias 9-cis-epoxycarotenoid dioxygenase, putative (AHRD V3.3... 0.01 Orthogroups_2024-Update
Sopen01g034310 No alias Retinal pigment epithelial membrane protein 0.02 Orthogroups_2024-Update
Sopen08g024140 No alias Retinal pigment epithelial membrane protein 0.02 Orthogroups_2024-Update
evm.model.contig_3463.3 No alias (at3g63520 : 142.0) Encodes a protein with... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004788 thiamine diphosphokinase activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
BP GO:0009229 thiamine diphosphate biosynthetic process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
BP GO:0042357 thiamine diphosphate metabolic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 100 233
IPR004294 Carotenoid_Oase 387 535
No external refs found!