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  5. evm.model.tig00001093.14

evm.model.tig00001093.14


Description : (at1g50500 : 121.0) encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress.; HEAT-INTOLERANT 1 (HIT1); CONTAINS InterPro DOMAIN/s: Vps53-like, N-terminal (InterPro:IPR007234); BEST Arabidopsis thaliana protein match is: Membrane trafficking VPS53 family protein (TAIR:AT1G50970.1). & (reliability: 242.0) & (original description: no original description)


Gene families : OG_42_0005512 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005512_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00001093.14
Cluster HCCA clusters: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
At1g50500 No alias Membrane trafficking VPS53 family protein... 0.02 Orthogroups_2024-Update
Bradi2g58070 No alias Membrane trafficking VPS53 family protein 0.02 Orthogroups_2024-Update
Kfl00139_0250 kfl00139_0250_v1.1 (at1g50500 : 840.0) encodes a member of VPS53 family... 0.01 Orthogroups_2024-Update
Mp8g18200.1 No alias component VPS53/HIT1 of GARP/EARP... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004181 metallocarboxypeptidase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005869 dynactin complex IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008235 metalloexopeptidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0042278 purine nucleoside metabolic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0046128 purine ribonucleoside metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
BP GO:1901068 guanosine-containing compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007234 Vps53_N 57 230
IPR007234 Vps53_N 281 475
No external refs found!