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  5. evm.model.tig00001336.2

evm.model.tig00001336.2


Description : (at3g16857 : 82.0) Encodes an Arabidopsis response regulator (ARR) protein that acts in concert with other type-B ARRs in the cytokinin signaling pathway.; response regulator 1 (RR1); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), Homeodomain-related (InterPro:IPR012287), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: response regulator 2 (TAIR:AT4G16110.1); Has 98862 Blast hits to 97820 proteins in 3027 species: Archae - 653; Bacteria - 87858; Metazoa - 53; Fungi - 404; Plants - 2787; Viruses - 5; Other Eukaryotes - 7102 (source: NCBI BLink). & (reliability: 164.0) & (original description: no original description)


Gene families : OG_42_0001261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001261_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00001336.2
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g62660 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00016111-RA No alias (at3g46640 : 221.0) Encodes a myb family transcription... 0.03 Orthogroups_2024-Update
Solyc06g076350 No alias LePCL1 0.02 Orthogroups_2024-Update
evm.model.contig_2051.13 No alias (at3g10760 : 85.9) Homeodomain-like superfamily protein;... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
MF GO:0003747 translation release factor activity IEP Predicted GO
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Predicted GO
MF GO:0004819 glutamine-tRNA ligase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
MF GO:0004865 protein serine/threonine phosphatase inhibitor activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005685 U1 snRNP IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006376 mRNA splice site selection IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006415 translational termination IEP Predicted GO
BP GO:0006418 tRNA aminoacylation for protein translation IEP Predicted GO
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008079 translation termination factor activity IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009892 negative regulation of metabolic process IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010563 negative regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
BP GO:0010923 negative regulation of phosphatase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0022411 cellular component disassembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031324 negative regulation of cellular metabolic process IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0031400 negative regulation of protein modification process IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032269 negative regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0032984 protein-containing complex disassembly IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0033365 protein localization to organelle IEP Predicted GO
BP GO:0034613 cellular protein localization IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0035305 negative regulation of dephosphorylation IEP Predicted GO
BP GO:0035308 negative regulation of protein dephosphorylation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043038 amino acid activation IEP Predicted GO
BP GO:0043039 tRNA aminoacylation IEP Predicted GO
BP GO:0043086 negative regulation of catalytic activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043624 cellular protein complex disassembly IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0044092 negative regulation of molecular function IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045936 negative regulation of phosphate metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051248 negative regulation of protein metabolic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051346 negative regulation of hydrolase activity IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0070727 cellular macromolecule localization IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072594 establishment of protein localization to organelle IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 106 154
No external refs found!