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  5. evm.model.tig00001388.4

evm.model.tig00001388.4


Description : (p05434|catr_chlre : 177.0) Caltractin (Centrin) (20 kDa calcium-binding protein) - Chlamydomonas reinhardtii & (at3g50360 : 148.0) centrin2 (CEN2); FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: centrin 2 (TAIR:AT4G37010.2); Has 32825 Blast hits to 20606 proteins in 1695 species: Archae - 1; Bacteria - 190; Metazoa - 13563; Fungi - 7187; Plants - 7027; Viruses - 2; Other Eukaryotes - 4855 (source: NCBI BLink). & (reliability: 296.0) & (original description: no original description)


Gene families : OG_42_0002887 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00001388.4
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
At3g50360 No alias Probable calcium-binding protein CML20... 0.01 Orthogroups_2024-Update
Cre06.g283550 No alias centrin2 0.03 Orthogroups_2024-Update
Cre11.g468450 No alias centrin2 0.01 Orthogroups_2024-Update
GRMZM2G096228 No alias centrin2 0.01 Orthogroups_2024-Update
Mp1g00710.1 No alias DNA repair protein (CEN2). centrin component CEN of... 0.01 Orthogroups_2024-Update
Sobic.002G376500.1 No alias centrin component *(CEN1/2) of TREX-2 mRNP trafficking... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Predicted GO
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000444 MIS12/MIND type complex IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0000818 nuclear MIS12/MIND complex IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0007021 tubulin complex assembly IEP Predicted GO
BP GO:0007023 post-chaperonin tubulin folding pathway IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0030991 intraciliary transport particle A IEP Predicted GO
CC GO:0031248 protein acetyltransferase complex IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0048029 monosaccharide binding IEP Predicted GO
MF GO:0048487 beta-tubulin binding IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:1902493 acetyltransferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 40 101
IPR002048 EF_hand_dom 124 173
No external refs found!