Description : (at2g29960 : 249.0) encodes a cyclophilin protein that exhibits peptidylprolyl cis/trans-isomerase and protein refolding activities that were sensitive to cyclosporin A. The protein interacts with GNOM in vitro and is localized to both the cytosolic and membrane fractions. The gene is expressed in the developing embryo.; cyclophilin 5 (CYP5); FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: protein folding; LOCATED IN: cytosol, Golgi stack, endoplasmic reticulum, membrane fraction, multivesicular body; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site (InterPro:IPR020892); BEST Arabidopsis thaliana protein match is: rotamase CYP 7 (TAIR:AT5G58710.1); Has 15750 Blast hits to 15712 proteins in 2648 species: Archae - 109; Bacteria - 6497; Metazoa - 2918; Fungi - 1356; Plants - 1258; Viruses - 4; Other Eukaryotes - 3608 (source: NCBI BLink). & (q39613|cyph_catro : 210.0) Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin) (Cyclosporin A-binding protein) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 498.0) & (original description: no original description)
Gene families : OG_42_0000307 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000307_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Cyanophora release: evm.model.tig00001636.9 | |
Cluster | HCCA clusters: Cluster_83 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At2g29960 | No alias | Peptidyl-prolyl cis-trans isomerase CYP19-4... | 0.01 | Orthogroups_2024-Update | |
At4g38740 | No alias | Peptidyl-prolyl cis-trans isomerase... | 0.02 | Orthogroups_2024-Update | |
Brara.C01118.1 | No alias | peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... | 0.02 | Orthogroups_2024-Update | |
Brara.E01328.1 | No alias | peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... | 0.02 | Orthogroups_2024-Update | |
GRMZM2G326111 | No alias | Cyclophilin-like peptidyl-prolyl cis-trans isomerase... | 0.01 | Orthogroups_2024-Update | |
Glyma.11G098700 | No alias | rotamase CYP 3 | 0.01 | Orthogroups_2024-Update | |
Seita.4G274500.1 | No alias | peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... | 0.02 | Orthogroups_2024-Update | |
Sobic.009G001500.1 | No alias | component *(PnsL5) of NDH lumen subcomplex L &... | 0.01 | Orthogroups_2024-Update | |
Sobic.010G258000.1 | No alias | peptidyl-prolyl cis-trans isomerase *(ROC7) & EC_5.2... | 0.02 | Orthogroups_2024-Update | |
Sopen06g017620 | No alias | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 0.01 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEA | InterProScan predictions |
MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004725 | protein tyrosine phosphatase activity | IEP | Predicted GO |
CC | GO:0005667 | transcription factor complex | IEP | Predicted GO |
CC | GO:0005672 | transcription factor TFIIA complex | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Predicted GO |
BP | GO:0006367 | transcription initiation from RNA polymerase II promoter | IEP | Predicted GO |
BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Predicted GO |
MF | GO:0008963 | phospho-N-acetylmuramoyl-pentapeptide-transferase activity | IEP | Predicted GO |
MF | GO:0016780 | phosphotransferase activity, for other substituted phosphate groups | IEP | Predicted GO |
CC | GO:0044798 | nuclear transcription factor complex | IEP | Predicted GO |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002130 | Cyclophilin-type_PPIase_dom | 54 | 232 |
No external refs found! |