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  5. Solyc05g013400

Solyc05g013400


Description : Pentatricopeptide repeat superfamily protein, putative (AHRD V3.3 *** A0A061GR61_THECC)


Gene families : OG_42_0009348 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009348_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g013400
Cluster HCCA clusters: Cluster_13


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0042802 identical protein binding IEP Predicted GO
MF GO:0042803 protein homodimerization activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 339 387
IPR002885 Pentatricopeptide_repeat 269 317
IPR002885 Pentatricopeptide_repeat 750 798
IPR002885 Pentatricopeptide_repeat 819 867
IPR002885 Pentatricopeptide_repeat 196 226
IPR002885 Pentatricopeptide_repeat 469 500
IPR002885 Pentatricopeptide_repeat 714 739
IPR002885 Pentatricopeptide_repeat 122 153
IPR002885 Pentatricopeptide_repeat 511 540
IPR002885 Pentatricopeptide_repeat 897 919
IPR002885 Pentatricopeptide_repeat 236 265
No external refs found!