1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. evm.model.tig00020560.16

evm.model.tig00020560.16


Description : (at3g06170 : 159.0) Serinc-domain containing serine and sphingolipid biosynthesis protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: TMS membrane protein/tumour differentially expressed protein (InterPro:IPR005016); BEST Arabidopsis thaliana protein match is: Serinc-domain containing serine and sphingolipid biosynthesis protein (TAIR:AT1G16180.2); Has 780 Blast hits to 771 proteins in 184 species: Archae - 0; Bacteria - 2; Metazoa - 443; Fungi - 127; Plants - 140; Viruses - 0; Other Eukaryotes - 68 (source: NCBI BLink). & (reliability: 318.0) & (original description: no original description)


Gene families : OG_42_0003708 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003708_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020560.16
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
Cre09.g412803 No alias Serinc-domain containing serine and sphingolipid... 0.02 Orthogroups_2024-Update
Sopen03g036680 No alias Serine incorporator (Serinc) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
InterPro domains Description Start Stop
IPR005016 TDE1/TMS 286 367
IPR005016 TDE1/TMS 2 189
IPR005016 TDE1/TMS 199 255
No external refs found!