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  5. evm.model.tig00020816.28

evm.model.tig00020816.28


Description : (at3g07530 : 130.0) CONTAINS InterPro DOMAIN/s: Beta-Casp domain (InterPro:IPR022712); BEST Arabidopsis thaliana protein match is: cleavage and polyadenylation specificity factor 73 kDa subunit-II (TAIR:AT2G01730.1); Has 624 Blast hits to 615 proteins in 160 species: Archae - 54; Bacteria - 6; Metazoa - 333; Fungi - 44; Plants - 93; Viruses - 0; Other Eukaryotes - 94 (source: NCBI BLink). & (reliability: 260.0) & (original description: no original description)


Gene families : OG_42_0009170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020816.28
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Potri.004G236000 No alias Function unknown 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 64 218
IPR022712 Beta_Casp 283 416
No external refs found!