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  5. Solyc05g023840

Solyc05g023840


Description : LOW QUALITY:Zinc ion binding,transcription regulators, putative (AHRD V3.3 *-* A0A061DM61_THECC)


Gene families : OG_42_0008147 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g023840
Cluster HCCA clusters: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
Mp3g04220.1 No alias Plant-specific TFIIB-related protein PTF2 OS=Arabidopsis... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!