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  5. Solyc05g024010

Solyc05g024010


Description : Zinc finger protein CONSTANS-LIKE 14 (AHRD V3.3 *** B9GMQ8_POPTR)


Gene families : OG_42_0006553 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006553_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g024010
Cluster HCCA clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
At1g28050 No alias Zinc finger protein CONSTANS-LIKE 15... 0.03 Orthogroups_2024-Update
Brara.G00824.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.16G050900 No alias B-box type zinc finger protein with CCT domain 0.04 Orthogroups_2024-Update
Sopen05g018710 No alias CCT motif 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Predicted GO
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR010402 CCT_domain 404 446
IPR000315 Znf_B-box 50 93
No external refs found!