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Description : (at1g12370 : 260.0) encodes an amino acid sequence with significant homology to the recently characterized type II photolyases. The uvr2-1 mutant is unable to remove CPDs in vivo, and plant extracts lack detectable photolyase activity , is sensitive to UV-B and is an allele; photolyase 1 (PHR1); CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), DNA photolyase, class 2 (InterPro:IPR008148); Has 2452 Blast hits to 2448 proteins in 660 species: Archae - 33; Bacteria - 979; Metazoa - 129; Fungi - 60; Plants - 123; Viruses - 39; Other Eukaryotes - 1089 (source: NCBI BLink). & (reliability: 520.0) & (original description: no original description)
Gene families : OG_42_0005942 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005942_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Cyanophora release: evm.model.tig00020952.44 | |
| Cluster | HCCA clusters: Cluster_15 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 96351 | No alias | photolyase 1 | 0.02 | Orthogroups_2024-Update | |
| Bradi3g22580 | No alias | photolyase 1 | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G029500 | Brara.B01276.1No alias | photolyase 1 | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G055930.10 | No alias | class II photolyase *(PHR1) & EC_4.1 carbon-carbon lyase | 0.03 | Orthogroups_2024-Update | |
| Pp1s72_320V6 | No alias | cpd photolyase | 0.02 | Orthogroups_2024-Update | |
| Seita.9G281600.1 | No alias | class II photolyase *(PHR1) & EC_4.1 carbon-carbon lyase | 0.01 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0001871 | pattern binding | IEP | Predicted GO |
| MF | GO:0003824 | catalytic activity | IEP | Predicted GO |
| MF | GO:0004133 | glycogen debranching enzyme activity | IEP | Predicted GO |
| MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Predicted GO |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Predicted GO |
| MF | GO:0004788 | thiamine diphosphokinase activity | IEP | Predicted GO |
| BP | GO:0006508 | proteolysis | IEP | Predicted GO |
| BP | GO:0008152 | metabolic process | IEP | Predicted GO |
| MF | GO:0008233 | peptidase activity | IEP | Predicted GO |
| MF | GO:0008237 | metallopeptidase activity | IEP | Predicted GO |
| BP | GO:0008272 | sulfate transport | IEP | Predicted GO |
| BP | GO:0009229 | thiamine diphosphate biosynthetic process | IEP | Predicted GO |
| MF | GO:0015116 | sulfate transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0015405 | P-P-bond-hydrolysis-driven transmembrane transporter activity | IEP | Predicted GO |
| CC | GO:0016020 | membrane | IEP | Predicted GO |
| CC | GO:0016021 | integral component of membrane | IEP | Predicted GO |
| MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | Predicted GO |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | Predicted GO |
| MF | GO:0016778 | diphosphotransferase activity | IEP | Predicted GO |
| MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
| MF | GO:0016887 | ATPase activity | IEP | Predicted GO |
| BP | GO:0017004 | cytochrome complex assembly | IEP | Predicted GO |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
| MF | GO:0030247 | polysaccharide binding | IEP | Predicted GO |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Predicted GO |
| BP | GO:0042357 | thiamine diphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0042623 | ATPase activity, coupled | IEP | Predicted GO |
| MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEP | Predicted GO |
| MF | GO:0043492 | ATPase activity, coupled to movement of substances | IEP | Predicted GO |
| MF | GO:0051213 | dioxygenase activity | IEP | Predicted GO |
| BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Predicted GO |
| BP | GO:0072348 | sulfur compound transport | IEP | Predicted GO |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
| MF | GO:1901682 | sulfur compound transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:2001070 | starch binding | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006050 | DNA_photolyase_N | 136 | 292 |
| No external refs found! |