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  5. evm.model.tig00020965.70

evm.model.tig00020965.70


Description : (q651u1|cryd_orysa : 216.0) Cryptochrome DASH, chloroplast/mitochondrial precursor - Oryza sativa (Rice) & (at5g24850 : 212.0) Binds flavin adenine dinucleotide and DNA. It does not have photolyase activity, and it is likely to act as photoreceptor. Closely related to Synechocystis cryptochrome.; cryptochrome 3 (CRY3); FUNCTIONS IN: FMN binding, DNA binding, DNA photolyase activity; INVOLVED IN: DNA repair; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), DNA photolyase, N-terminal (InterPro:IPR006050), Cryptochrome, DASH (InterPro:IPR014133), DNA photolyase, FAD-binding/Cryptochrome, C-terminal (InterPro:IPR005101), Cryptochrome/DNA photolyase, class 1 (InterPro:IPR002081); BEST Arabidopsis thaliana protein match is: photolyase/blue-light receptor 2 (TAIR:AT2G47590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). & (reliability: 424.0) & (original description: no original description)


Gene families : OG_42_0001991 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00020965.70
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
106065 No alias cryptochrome 3 0.03 Orthogroups_2024-Update
At2g47590 No alias At2g47590 [Source:UniProtKB/TrEMBL;Acc:Q058P5] 0.01 Orthogroups_2024-Update
At5g24850 No alias Cryptochrome DASH, chloroplastic/mitochondrial... 0.02 Orthogroups_2024-Update
Bradi1g31670 No alias cryptochrome 3 0.02 Orthogroups_2024-Update
Bradi1g62840 No alias photolyase/blue-light receptor 2 0.01 Orthogroups_2024-Update
Brara.F02692.1 No alias cryptochrome-DASH photoreceptor *(CRYD) 0.01 Orthogroups_2024-Update
Glyma.04G074500 No alias cryptochrome 3 0.01 Orthogroups_2024-Update
Glyma.10G017900 No alias photolyase/blue-light receptor 2 0.01 Orthogroups_2024-Update
HORVU7Hr1G109800.14 No alias cryptochrome-DASH photoreceptor *(CRYD) 0.03 Orthogroups_2024-Update
Kfl00383_0070 kfl00383_0070_v1.1 (at2g47590 : 367.0) photolyase/blue light photoreceptor... 0.01 Orthogroups_2024-Update
LOC_Os06g45100 No alias FAD binding domain of DNA photolyase domain containing... 0.01 Orthogroups_2024-Update
MA_10436605g0010 No alias (at2g47590 : 209.0) photolyase/blue light photoreceptor... 0.02 Orthogroups_2024-Update
Mp1g05530.1 No alias Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Mp1g25600.1 No alias Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza... 0.02 Orthogroups_2024-Update
Potri.006G277500 No alias cryptochrome 3 0.02 Orthogroups_2024-Update
Pp1s488_10V6 No alias probable bacterial cryptochrome 0.01 Orthogroups_2024-Update
Seita.4G187800.1 No alias cryptochrome-DASH photoreceptor *(CRYD) 0.02 Orthogroups_2024-Update
Solyc08g074270 No alias Cryptochrome DASH, chloroplastic/mitochondrial (AHRD... 0.01 Orthogroups_2024-Update
evm.model.contig_2270.2 No alias (at5g24850 : 457.0) Binds flavin adenine dinucleotide... 0.02 Orthogroups_2024-Update
evm.model.contig_527.26 No alias (at4g08920 : 147.0) Encodes CRY1, a flavin-type... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004133 glycogen debranching enzyme activity IEP Predicted GO
MF GO:0004134 4-alpha-glucanotransferase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0005347 ATP transmembrane transporter activity IEP Predicted GO
MF GO:0005471 ATP:ADP antiporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006473 protein acetylation IEP Predicted GO
BP GO:0006475 internal protein amino acid acetylation IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006862 nucleotide transport IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0015215 nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Predicted GO
MF GO:0015217 ADP transmembrane transporter activity IEP Predicted GO
MF GO:0015301 anion:anion antiporter activity IEP Predicted GO
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016573 histone acetylation IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
BP GO:0018393 internal peptidyl-lysine acetylation IEP Predicted GO
BP GO:0018394 peptidyl-lysine acetylation IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0043543 protein acylation IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:0099516 ion antiporter activity IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 98 289
No external refs found!