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  5. Solyc05g025840

Solyc05g025840


No description available


Gene families : OG_42_0000887 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g025840
Cluster HCCA clusters: Cluster_211

Target Alias Description ECC score Gene Family Method Actions
Solyc04g049560 No alias No description available 0.03 Orthogroups_2024-Update
Solyc07g042050 No alias No description available 0.04 Orthogroups_2024-Update
Sopen05g027720 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen12g020250 No alias Ulp1 protease family, C-terminal catalytic domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!