1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. evm.model.tig00021073.61

evm.model.tig00021073.61


Description : (at2g44900 : 115.0) ARABIDILLO-1 and its homolog, ARABIDILLO -2, are unique among Arabidopsis Arm-repeat proteins in having an F-box motif and fall into a phylogenetically distinct subgroup from other plant Arm-repeat proteins Similar to arm repeat protein in rice and armadillo/beta-catenin repeat family protein / F-box family protein in Dictyostelium. ARABIDILLO-1 promote lateral root development. Mutant plants form fewer lateral roots, while ARABIDILLO-1-overexpressing lines produce more lateral roots than wild-type seedlings.; ARABIDILLO-1 (ARABIDILLO-1); FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: lateral root development; LOCATED IN: nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARABIDILLO-2 (TAIR:AT3G60350.1); Has 10074 Blast hits to 5287 proteins in 284 species: Archae - 0; Bacteria - 24; Metazoa - 4121; Fungi - 736; Plants - 4117; Viruses - 0; Other Eukaryotes - 1076 (source: NCBI BLink). & (reliability: 218.0) & (original description: no original description)


Gene families : OG_42_0006328 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006328_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021073.61
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Brara.B03687.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Mp5g03730.1 No alias no hits & (original description: none) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004619 phosphoglycerate mutase activity IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006007 glucose catabolic process IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0016052 carbohydrate catabolic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019320 hexose catabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0030145 manganese ion binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046365 monosaccharide catabolic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000225 Armadillo 605 630
IPR000225 Armadillo 672 701
IPR000225 Armadillo 768 796
IPR000225 Armadillo 509 547
IPR000225 Armadillo 703 741
IPR000225 Armadillo 859 899
IPR002782 Mut7-C_RNAse_dom 34 249
No external refs found!