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  5. evm.model.tig00021108.38

evm.model.tig00021108.38


Description : (at3g27785 : 130.0) putative transcription factor (MYB118); myb domain protein 118 (MYB118); FUNCTIONS IN: DNA binding, transcription activator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: rosette leaf, embryo, fruit, cauline leaf, flower; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 115 (TAIR:AT5G40360.1); Has 9843 Blast hits to 8432 proteins in 561 species: Archae - 0; Bacteria - 0; Metazoa - 1160; Fungi - 755; Plants - 5742; Viruses - 7; Other Eukaryotes - 2179 (source: NCBI BLink). & (p93417|gam1_orysa : 99.8) Transcription factor GAMYB (OsGAMyb) - Oryza sativa (Rice) & (reliability: 260.0) & (original description: no original description)


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021108.38
Cluster HCCA clusters: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Glyma.02G108800 No alias myb domain protein 105 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 5 57
IPR001005 SANT/Myb 63 106
No external refs found!