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  5. evm.model.tig00021127.40

evm.model.tig00021127.40


Description : (at4g02930 : 461.0) GTP binding Elongation factor Tu family protein; FUNCTIONS IN: translation elongation factor activity, cobalt ion binding, zinc ion binding, ATP binding; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion, cell wall; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor EFTu/EF1A, bacterial/organelle (InterPro:IPR004541), Translation elongation factor EFTu/EF1A, C-terminal (InterPro:IPR004160), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro:IPR009001), Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: RAB GTPase homolog E1B (TAIR:AT4G20360.1); Has 89361 Blast hits to 89296 proteins in 17600 species: Archae - 1195; Bacteria - 40691; Metazoa - 19476; Fungi - 9897; Plants - 2075; Viruses - 6; Other Eukaryotes - 16021 (source: NCBI BLink). & (p56292|eftu_chlvu : 394.0) Elongation factor Tu (EF-Tu) - Chlorella vulgaris (Green alga) & (reliability: 922.0) & (original description: no original description)


Gene families : OG_42_0001287 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021127.40
Cluster HCCA clusters: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
153081 No alias GTP binding Elongation factor Tu family protein 0.01 Orthogroups_2024-Update
233481 No alias RAB GTPase homolog E1B 0.03 Orthogroups_2024-Update
At4g02930 No alias Elongation factor Tu, mitochondrial... 0.01 Orthogroups_2024-Update
At4g20360 No alias Elongation factor Tu, chloroplastic... 0.02 Orthogroups_2024-Update
Bradi1g01580 No alias GTP binding Elongation factor Tu family protein 0.02 Orthogroups_2024-Update
Brara.C02781.1 No alias translation elongation factor *(EF-Tu) 0.02 Orthogroups_2024-Update
Cre06.g259150 No alias GTP binding Elongation factor Tu family protein 0.01 Orthogroups_2024-Update
GRMZM2G106061 No alias RAB GTPase homolog E1B 0.01 Orthogroups_2024-Update
GRMZM2G313678 No alias GTP binding Elongation factor Tu family protein 0.01 Orthogroups_2024-Update
Glyma.03G150600 No alias GTP binding Elongation factor Tu family protein 0.01 Orthogroups_2024-Update
Glyma.04G188700 No alias RAB GTPase homolog E1B 0.01 Orthogroups_2024-Update
Glyma.06G176900 No alias RAB GTPase homolog E1B 0.02 Orthogroups_2024-Update
Glyma.17G124451 No alias RAB GTPase homolog E1B 0.01 Orthogroups_2024-Update
HORVU5Hr1G122350.2 No alias translation elongation factor *(EF-Tu) 0.01 Orthogroups_2024-Update
HORVU6Hr1G053680.5 No alias translation elongation factor *(EF-Tu) 0.02 Orthogroups_2024-Update
MA_942991g0010 No alias (q43467|eftu1_soybn : 680.0) Elongation factor Tu,... 0.01 Orthogroups_2024-Update
PSME_00008602-RA No alias (q43467|eftu1_soybn : 699.0) Elongation factor Tu,... 0.03 Orthogroups_2024-Update
Potri.003G121600 No alias RAB GTPase homolog E1B 0.01 Orthogroups_2024-Update
Potri.014G138100 No alias GTP binding Elongation factor Tu family protein 0.01 Orthogroups_2024-Update
Seita.1G218300.1 No alias translation elongation factor *(EF-Tu) 0.01 Orthogroups_2024-Update
Sobic.001G011000.1 No alias translation elongation factor *(EF-Tu) 0.01 Orthogroups_2024-Update
Solyc06g008940 No alias Elongation factor Tu (AHRD V3.3 *** K4C3S4_SOLLC) 0.01 Orthogroups_2024-Update
Solyc09g073000 No alias Elongation factor Tu (AHRD V3.3 *** K4CUX6_SOLLC) 0.01 Orthogroups_2024-Update
Sopen06g003690 No alias Elongation factor Tu GTP binding domain 0.01 Orthogroups_2024-Update
Sopen09g028810 No alias Elongation factor Tu GTP binding domain 0.03 Orthogroups_2024-Update
evm.model.contig_556.2 No alias (p56292|eftu_chlvu : 582.0) Elongation factor Tu (EF-Tu)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000795 TF_GTP-bd_dom 51 244
IPR004161 EFTu-like_2 268 344
IPR004160 Transl_elong_EFTu/EF1A_C 381 423
No external refs found!