Description : Pumilio-like protein (AHRD V3.3 *** A0A0B0MGW0_GOSAR)
Gene families : OG_42_0004039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004039_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc01g065580 | |
Cluster | HCCA clusters: Cluster_26 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g16810 | No alias | Pumilio homolog 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ3] | 0.06 | Orthogroups_2024-Update | |
Bradi1g03030 | No alias | pumilio 24 | 0.14 | Orthogroups_2024-Update | |
Brara.E02483.1 | No alias | rRNA processing factor involved in ITS2 rRNA removal *(APUM24) | 0.06 | Orthogroups_2024-Update | |
Cre12.g528950 | No alias | pumilio 24 | 0.07 | Orthogroups_2024-Update | |
HORVU5Hr1G116320.2 | No alias | rRNA processing factor involved in ITS2 rRNA removal *(APUM24) | 0.08 | Orthogroups_2024-Update | |
Kfl00404_0120 | kfl00404_0120_v1.1 | (at3g16810 : 260.0) Encodes a member of the Arabidopsis... | 0.02 | Orthogroups_2024-Update | |
Mp7g01710.1 | No alias | APUM24 rRNA processing factor involved in ITS2 rRNA removal | 0.02 | Orthogroups_2024-Update | |
Potri.008G211400 | No alias | pumilio 24 | 0.08 | Orthogroups_2024-Update | |
Pp1s263_19V6 | No alias | kiaa0020 protein | 0.08 | Orthogroups_2024-Update | |
Seita.9G025100.1 | No alias | rRNA processing factor involved in ITS2 rRNA removal *(APUM24) | 0.12 | Orthogroups_2024-Update | |
Sobic.001G024000.1 | No alias | rRNA processing factor involved in ITS2 rRNA removal *(APUM24) | 0.12 | Orthogroups_2024-Update | |
Sopen01g026980 | No alias | Pumilio-family RNA binding repeat | 0.18 | Orthogroups_2024-Update | |
evm.model.contig_516.2 | No alias | (gnl|cdd|68872 : 113.0) no description available &... | 0.04 | Orthogroups_2024-Update | |
evm.model.tig00000615.61 | No alias | (at3g16810 : 157.0) Encodes a member of the Arabidopsis... | 0.08 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000049 | tRNA binding | IEP | Predicted GO |
BP | GO:0002097 | tRNA wobble base modification | IEP | Predicted GO |
BP | GO:0002098 | tRNA wobble uridine modification | IEP | Predicted GO |
CC | GO:0005741 | mitochondrial outer membrane | IEP | Predicted GO |
CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | Predicted GO |
BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
BP | GO:0006399 | tRNA metabolic process | IEP | Predicted GO |
BP | GO:0006400 | tRNA modification | IEP | Predicted GO |
BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
BP | GO:0006839 | mitochondrial transport | IEP | Predicted GO |
BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
MF | GO:0016743 | carboxyl- or carbamoyltransferase activity | IEP | Predicted GO |
BP | GO:0017038 | protein import | IEP | Predicted GO |
BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
CC | GO:0019867 | outer membrane | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
BP | GO:0030150 | protein import into mitochondrial matrix | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0031968 | organelle outer membrane | IEP | Predicted GO |
CC | GO:0032040 | small-subunit processome | IEP | Predicted GO |
CC | GO:0033588 | Elongator holoenzyme complex | IEP | Predicted GO |
BP | GO:0034470 | ncRNA processing | IEP | Predicted GO |
BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
CC | GO:0044429 | mitochondrial part | IEP | Predicted GO |
BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | Predicted GO |
BP | GO:0065002 | intracellular protein transmembrane transport | IEP | Predicted GO |
BP | GO:0070585 | protein localization to mitochondrion | IEP | Predicted GO |
BP | GO:0071806 | protein transmembrane transport | IEP | Predicted GO |
BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | Predicted GO |
CC | GO:0098588 | bounding membrane of organelle | IEP | Predicted GO |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Predicted GO |
CC | GO:0098805 | whole membrane | IEP | Predicted GO |
BP | GO:1990542 | mitochondrial transmembrane transport | IEP | Predicted GO |
No external refs found! |