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  5. evm.model.tig00021244.33

evm.model.tig00021244.33


Description : (at4g30560 : 102.0) member of Cyclic nucleotide gated channel family; cyclic nucleotide gated channel 9 (CNGC9); FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding; INVOLVED IN: potassium ion transport, ion transport, transmembrane transport; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Potassium channel, voltage-dependent, EAG/ELK/ERG (InterPro:IPR003938), Cyclic nucleotide-binding-like (InterPro:IPR018490), Ion transport (InterPro:IPR005821), RmlC-like jelly roll fold (InterPro:IPR014710), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 6 (TAIR:AT2G23980.1). & (q8vyx2|akt1_orysa : 80.9) Potassium channel AKT1 (OsAKT1) - Oryza sativa (Rice) & (reliability: 204.0) & (original description: no original description)


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021244.33
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
A4A49_19266 No alias putative cyclic nucleotide-gated ion channel 8 0.02 Orthogroups_2024-Update
A4A49_26569 No alias putative cyclic nucleotide-gated ion channel 16 0.02 Orthogroups_2024-Update
GRMZM2G090528 No alias cyclic nucleotide-gated cation channel 4 0.02 Orthogroups_2024-Update
GRMZM2G161800 No alias cyclic nucleotide-binding transporter 1 0.01 Orthogroups_2024-Update
GRMZM2G169788 No alias cyclic nucleotide gated channel 1 0.02 Orthogroups_2024-Update
Glyma.12G152300 No alias cyclic nucleotide gated channel 5 0.01 Orthogroups_2024-Update
Glyma.12G219000 No alias cyclic nucleotide-gated cation channel 4 0.02 Orthogroups_2024-Update
HORVU5Hr1G049240.3 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.01 Orthogroups_2024-Update
MA_10435474g0010 No alias (at2g23980 : 328.0) member of Cyclic nucleotide gated... 0.03 Orthogroups_2024-Update
MA_175873g0010 No alias (at5g54250 : 805.0) member of Cyclic nucleotide gated... 0.01 Orthogroups_2024-Update
Seita.1G346900.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.01 Orthogroups_2024-Update
Seita.4G044900.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.01 Orthogroups_2024-Update
Seita.9G156700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.009G188800.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Sobic.010G153700.2 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.01 Orthogroups_2024-Update
Sopen12g004880 No alias Ion transport protein 0.02 Orthogroups_2024-Update
evm.model.tig00021348.58 No alias (at1g19780 : 96.3) member of Cyclic nucleotide gated... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Predicted GO
MF GO:0004620 phospholipase activity IEP Predicted GO
MF GO:0004629 phospholipase C activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 139 223
No external refs found!