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- Sequence
- evm.model.tig00021318.60
evm.model.tig00021318.60
Description : (at3g45300 : 498.0) Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.; isovaleryl-CoA-dehydrogenase (IVD); FUNCTIONS IN: isovaleryl-CoA dehydrogenase activity, ATP binding; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, mitochondrial matrix; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl-CoA oxidase/dehydrogenase, type1/2, C-terminal (InterPro:IPR013764), Acyl-CoA oxidase/dehydrogenase, type 1 (InterPro:IPR006090), Acyl-CoA dehydrogenase/oxidase, N-terminal (InterPro:IPR013786), Acyl-CoA dehydrogenase/oxidase (InterPro:IPR009100), Acyl-CoA oxidase/dehydrogenase, central domain (InterPro:IPR006091), Acyl-CoA dehydrogenase, conserved site (InterPro:IPR006089), Acyl-CoA dehydrogenase/oxidase C-terminal (InterPro:IPR009075), Acyl-CoA dehydrogenase, N-terminal (InterPro:IPR006092); BEST Arabidopsis thaliana protein match is: acyl-CoA oxidase 4 (TAIR:AT3G51840.1); Has 45583 Blast hits to 45129 proteins in 2067 species: Archae - 559; Bacteria - 29477; Metazoa - 1687; Fungi - 835; Plants - 308; Viruses - 0; Other Eukaryotes - 12717 (source: NCBI BLink). & (q9fs87|ivd2_soltu : 492.0) Isovaleryl-CoA dehydrogenase 2, mitochondrial precursor (EC 1.3.99.10) (IVD 2) (Fragment) - Solanum tuberosum (Potato) & (reliability: 996.0) & (original description: no original description)
Expression Profile
Attention: This gene has low abundance.
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
| Type | Description | Actions |
| Neighborhood | Cyanophora release: evm.model.tig00021318.60 | |
| Cluster | HCCA clusters: Cluster_94 | |
Functional Annotation
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0000166 | nucleotide binding | None | Extended |
| MF | GO:0003674 | molecular_function | None | Extended |
| MF | GO:0003824 | catalytic activity | None | Extended |
| MF | GO:0005488 | binding | None | Extended |
| BP | GO:0008150 | biological_process | None | Extended |
| BP | GO:0008152 | metabolic process | None | Extended |
| MF | GO:0016491 | oxidoreductase activity | None | Extended |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEA | InterProScan predictions |
| MF | GO:0036094 | small molecule binding | None | Extended |
| MF | GO:0043167 | ion binding | None | Extended |
| MF | GO:0043168 | anion binding | None | Extended |
| MF | GO:0048037 | cofactor binding | None | Extended |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEA | InterProScan predictions |
| MF | GO:0050662 | coenzyme binding | None | Extended |
| BP | GO:0055114 | oxidation-reduction process | IEA | InterProScan predictions |
| MF | GO:0097159 | organic cyclic compound binding | None | Extended |
| MF | GO:1901265 | nucleoside phosphate binding | None | Extended |
| MF | GO:1901363 | heterocyclic compound binding | None | Extended |
| Type | GO Term | Name | Evidence | Source |
| MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
| BP | GO:0006308 | DNA catabolic process | IEP | Predicted GO |
| BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
| BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
| BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Predicted GO |
| MF | GO:0008194 | UDP-glycosyltransferase activity | IEP | Predicted GO |
| MF | GO:0008289 | lipid binding | IEP | Predicted GO |
| MF | GO:0008374 | O-acyltransferase activity | IEP | Predicted GO |
| MF | GO:0008915 | lipid-A-disaccharide synthase activity | IEP | Predicted GO |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Predicted GO |
| BP | GO:0009245 | lipid A biosynthetic process | IEP | Predicted GO |
| BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:0016051 | carbohydrate biosynthetic process | IEP | Predicted GO |
| MF | GO:0016791 | phosphatase activity | IEP | Predicted GO |
| CC | GO:0044451 | nucleoplasm part | IEP | Predicted GO |
| BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0046493 | lipid A metabolic process | IEP | Predicted GO |
| CC | GO:0070449 | elongin complex | IEP | Predicted GO |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Predicted GO |
| BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Predicted GO |
| BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Predicted GO |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Predicted GO |
| BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
| IPR013786 | AcylCoA_DH/ox_N | 24 | 136 |
| IPR006091 | Acyl-CoA_Oxase/DH_cen-dom | 140 | 235 |
| IPR009075 | AcylCo_DH/oxidase_C | 241 | 376 |
