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  5. evm.model.tig00021350.36

evm.model.tig00021350.36


Description : (o65316|act_mesvi : 705.0) Actin - Mesostigma viride & (at3g12110 : 702.0) Encodes an actin that is expressed predominantly during reproductive development.; actin-11 (ACT11); FUNCTIONS IN: structural constituent of cytoskeleton; INVOLVED IN: response to cyclopentenone, actin cytoskeleton organization; LOCATED IN: mitochondrion, cytoskeleton, plasma membrane; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Actin, conserved site (InterPro:IPR004001), Actin/actin-like (InterPro:IPR004000), Actin/actin-like conserved site (InterPro:IPR020902); BEST Arabidopsis thaliana protein match is: actin 3 (TAIR:AT3G53750.1); Has 15186 Blast hits to 14782 proteins in 3039 species: Archae - 6; Bacteria - 12; Metazoa - 5717; Fungi - 5233; Plants - 1598; Viruses - 2; Other Eukaryotes - 2618 (source: NCBI BLink). & (reliability: 1298.0) & (original description: no original description)


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Cyanophora release: evm.model.tig00021350.36
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Bradi2g24070 No alias actin 7 0.02 Orthogroups_2024-Update
Bradi4g41850 No alias actin 7 0.01 Orthogroups_2024-Update
Brara.D02290.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
Brara.E02316.1 No alias actin filament protein 0.01 Orthogroups_2024-Update
HORVU3Hr1G083370.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G083380.4 No alias actin filament protein 0.02 Orthogroups_2024-Update
PSME_00002140-RA No alias (o81221|act_goshi : 745.0) Actin - Gossypium hirsutum... 0.01 Orthogroups_2024-Update
Seita.3G069200.1 No alias actin filament protein 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0031419 cobalamin binding IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004000 Actin 3 375
No external refs found!