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  5. Solyc05g052620

Solyc05g052620


Description : Coronatine-insensitive 1


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g052620
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
168175 No alias auxin signaling F-box 2 0.04 Orthogroups_2024-Update
At1g12820 No alias Protein AUXIN SIGNALING F-BOX 3... 0.04 Orthogroups_2024-Update
At4g03190 No alias GRR1-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZR12] 0.02 Orthogroups_2024-Update
Bradi3g58327 No alias auxin F-box protein 5 0.02 Orthogroups_2024-Update
Brara.I05093.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.03 Orthogroups_2024-Update
Glyma.03G209400 No alias F-box/RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.14G062100 No alias RNI-like superfamily protein 0.04 Orthogroups_2024-Update
Kfl00434_0030 kfl00434_0030_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_121693g0010 No alias (at5g49980 : 727.0) auxin F-box protein 5 (AFB5);... 0.02 Orthogroups_2024-Update
MA_14836g0010 No alias (at3g62980 : 733.0) Encodes an auxin receptor that... 0.02 Orthogroups_2024-Update
Mp2g26590.1 No alias component COI of jasmonic acid receptor complex 0.02 Orthogroups_2024-Update
Potri.001G323100 No alias auxin signaling F-box 2 0.03 Orthogroups_2024-Update
Sopen02g023990 No alias Leucine Rich repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006817 phosphate ion transport IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!