Description : 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO)
Gene families : OG_42_0001366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001366_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc05g052800 | |
Cluster | HCCA clusters: Cluster_14 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.B02119.1 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.D00376.1 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Brara.G03191.1 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Brara.I03824.1 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Cre10.g459250 | No alias | Ribosomal protein L35Ae family protein | 0.07 | Orthogroups_2024-Update | |
GRMZM2G181336 | No alias | Ribosomal protein L35Ae family protein | 0.03 | Orthogroups_2024-Update | |
Glyma.05G132500 | No alias | Ribosomal protein L35Ae family protein | 0.04 | Orthogroups_2024-Update | |
Glyma.08G087000 | No alias | Ribosomal protein L35Ae family protein | 0.06 | Orthogroups_2024-Update | |
Glyma.14G062900 | No alias | Ribosomal protein L35Ae family protein | 0.05 | Orthogroups_2024-Update | |
HORVU6Hr1G083120.2 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
HORVU7Hr1G031850.4 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Kfl00148_0220 | kfl00148_0220_v1.1 | (at3g55750 : 81.6) Ribosomal protein L35Ae family... | 0.02 | Orthogroups_2024-Update | |
MA_79041g0010 | No alias | (at1g74270 : 149.0) Ribosomal protein L35Ae family... | 0.03 | Orthogroups_2024-Update | |
Mp1g11470.1 | No alias | component RPL35a of LSU proteome component | 0.03 | Orthogroups_2024-Update | |
PSME_00007301-RA | No alias | (at1g74270 : 157.0) Ribosomal protein L35Ae family... | 0.04 | Orthogroups_2024-Update | |
Potri.010G194200 | No alias | Ribosomal protein L35Ae family protein | 0.04 | Orthogroups_2024-Update | |
Pp1s1_549V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Pp1s2_655V6 | No alias | 60s ribosomal protein | 0.06 | Orthogroups_2024-Update | |
Pp1s52_116V6 | No alias | 60s ribosomal protein | 0.05 | Orthogroups_2024-Update | |
Pp1s61_123V6 | No alias | 60s ribosomal protein | 0.04 | Orthogroups_2024-Update | |
Sobic.002G179300.1 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.04 | Orthogroups_2024-Update | |
Sobic.004G322200.1 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Sobic.010G070500.1 | No alias | component *(eL33) of large ribosomal-subunit (LSU) proteome | 0.03 | Orthogroups_2024-Update | |
Solyc03g096360 | No alias | 60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO) | 0.04 | Orthogroups_2024-Update | |
Sopen03g026480 | No alias | Ribosomal protein L35Ae | 0.06 | Orthogroups_2024-Update | |
Sopen05g031310 | No alias | Ribosomal protein L35Ae | 0.03 | Orthogroups_2024-Update | |
Sopen05g031320 | No alias | Ribosomal protein L35Ae | 0.03 | Orthogroups_2024-Update | |
evm.model.contig_2130.2 | No alias | (at1g74270 : 120.0) Ribosomal protein L35Ae family... | 0.08 | Orthogroups_2024-Update | |
evm.model.tig00020723.23 | No alias | (at3g55750 : 148.0) Ribosomal protein L35Ae family... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000726 | non-recombinational repair | IEP | Predicted GO |
MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | Predicted GO |
MF | GO:0004003 | ATP-dependent DNA helicase activity | IEP | Predicted GO |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Predicted GO |
MF | GO:0005092 | GDP-dissociation inhibitor activity | IEP | Predicted GO |
MF | GO:0005094 | Rho GDP-dissociation inhibitor activity | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
MF | GO:0008026 | ATP-dependent helicase activity | IEP | Predicted GO |
MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Predicted GO |
MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | Predicted GO |
CC | GO:0015934 | large ribosomal subunit | IEP | Predicted GO |
MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Predicted GO |
MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Predicted GO |
MF | GO:0017048 | Rho GTPase binding | IEP | Predicted GO |
MF | GO:0019104 | DNA N-glycosylase activity | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | Predicted GO |
CC | GO:0044391 | ribosomal subunit | IEP | Predicted GO |
MF | GO:0070035 | purine NTP-dependent helicase activity | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001780 | Ribosomal_L35A | 12 | 99 |
No external refs found! |