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  5. Solyc05g053160

Solyc05g053160


Description : AWPM-19-like membrane family protein (AHRD V3.3 *** B9HSV5_POPTR)


Gene families : OG_42_0000530 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000530_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc05g053160
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Bradi2g25960 No alias AWPM-19-like family protein 0.02 Orthogroups_2024-Update
Bradi2g47520 No alias AWPM-19-like family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G125460.4 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_237930g0010 No alias (at1g29520 : 115.0) AWPM-19-like family protein;... 0.04 Orthogroups_2024-Update
Potri.001G354500 No alias AWPM-19-like family protein 0.03 Orthogroups_2024-Update
Potri.011G077800 No alias AWPM-19-like family protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0044030 regulation of DNA methylation IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 143
No external refs found!