Solyc06g008170

Description : 50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR)

Gene families : OG_42_0001290 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001290_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc06g008170
Cluster	HCCA clusters: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
165708	No alias	Ribosomal protein L14p/L23e family protein	0.08	Orthogroups_2024-Update
A4A49_26558	No alias	60s ribosomal protein l23	0.03	Orthogroups_2024-Update
At1g04480	No alias	At2g33370 [Source:UniProtKB/TrEMBL;Acc:Q1H559]	0.03	Orthogroups_2024-Update
Bradi1g75790	No alias	Ribosomal protein L14p/L23e family protein	0.06	Orthogroups_2024-Update
Bradi3g28300	No alias	Ribosomal protein L14p/L23e family protein	0.07	Orthogroups_2024-Update
Bradi3g55140	No alias	Ribosomal protein L14p/L23e family protein	0.07	Orthogroups_2024-Update
Brara.A03771.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Brara.C03052.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Brara.E03449.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Brara.H03046.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Brara.I05490.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.11	Orthogroups_2024-Update
Brara.J00259.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Cre04.g211800	No alias	Ribosomal protein L14p/L23e family protein	0.07	Orthogroups_2024-Update
GRMZM2G123495	No alias	Ribosomal protein L14p/L23e family protein	0.04	Orthogroups_2024-Update
GRMZM2G150058	No alias	Ribosomal protein L14p/L23e family protein	0.04	Orthogroups_2024-Update
GRMZM2G171181	No alias	Ribosomal protein L14p/L23e family protein	0.03	Orthogroups_2024-Update
Glyma.13G126400	No alias	Ribosomal protein L14p/L23e family protein	0.1	Orthogroups_2024-Update
Glyma.19G167800	No alias	Ribosomal protein L14p/L23e family protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G039160.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
HORVU4Hr1G083840.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
HORVU6Hr1G090170.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Kfl00761_0070	kfl00761_0070_v1.1	(at3g04400 : 234.0) embryo defective 2171 (emb2171);...	0.03	Orthogroups_2024-Update
Mp5g05580.1	No alias	component RPL23 of LSU proteome component	0.02	Orthogroups_2024-Update
Mp6g14310.1	No alias	component RPL23 of LSU proteome component	0.05	Orthogroups_2024-Update
PSME_00015897-RA	No alias	(at3g04400 : 271.0) embryo defective 2171 (emb2171);...	0.06	Orthogroups_2024-Update
Potri.002G257500	No alias	Ribosomal protein L14p/L23e family protein	0.03	Orthogroups_2024-Update
Pp1s114_79V6	No alias	60s ribosomal protein l23	0.04	Orthogroups_2024-Update
Pp1s15_152V6	No alias	60s ribosomal protein l23	0.02	Orthogroups_2024-Update
Pp1s280_69V6	No alias	60s ribosomal protein l23	0.08	Orthogroups_2024-Update
Pp1s73_232V6	No alias	60s ribosomal protein l23	0.05	Orthogroups_2024-Update
Seita.1G363100.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Seita.9G228700.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.04	Orthogroups_2024-Update
Sobic.001G510800.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.09	Orthogroups_2024-Update
Sobic.004G342400.1	No alias	component *(uL14) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Solyc09g090610	No alias	50S ribosomal protein L14 (AHRD V3.3 *** A0A0K9PMD0_ZOSMR)	0.04	Orthogroups_2024-Update
Sopen06g035190	No alias	Ribosomal protein L14p/L23e	0.07	Orthogroups_2024-Update
Sopen09g028670	No alias	Ribosomal protein L14p/L23e	0.05	Orthogroups_2024-Update
Sopen09g033550	No alias	Ribosomal protein L14p/L23e	0.09	Orthogroups_2024-Update
evm.model.contig_548.2	No alias	(at3g04400 : 225.0) embryo defective 2171 (emb2171);...	0.09	Orthogroups_2024-Update
evm.model.tig00021290.9	No alias	(at3g04400 : 253.0) embryo defective 2171 (emb2171);...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Predicted GO
BP	GO:0001522	pseudouridine synthesis	IEP	Predicted GO
MF	GO:0003676	nucleic acid binding	IEP	Predicted GO
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004550	nucleoside diphosphate kinase activity	IEP	Predicted GO
CC	GO:0005622	intracellular	IEP	Predicted GO
CC	GO:0005739	mitochondrion	IEP	Predicted GO
CC	GO:0005742	mitochondrial outer membrane translocase complex	IEP	Predicted GO
BP	GO:0006183	GTP biosynthetic process	IEP	Predicted GO
BP	GO:0006213	pyrimidine nucleoside metabolic process	IEP	Predicted GO
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	Predicted GO
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0006228	UTP biosynthetic process	IEP	Predicted GO
BP	GO:0006241	CTP biosynthetic process	IEP	Predicted GO
BP	GO:0006457	protein folding	IEP	Predicted GO
BP	GO:0006839	mitochondrial transport	IEP	Predicted GO
MF	GO:0008168	methyltransferase activity	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
BP	GO:0009147	pyrimidine nucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009148	pyrimidine nucleoside triphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009163	nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0009208	pyrimidine ribonucleoside triphosphate metabolic process	IEP	Predicted GO
BP	GO:0009209	pyrimidine ribonucleoside triphosphate biosynthetic process	IEP	Predicted GO
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	Predicted GO
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	Predicted GO
BP	GO:0016485	protein processing	IEP	Predicted GO
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	Predicted GO
MF	GO:0016776	phosphotransferase activity, phosphate group as acceptor	IEP	Predicted GO
BP	GO:0017038	protein import	IEP	Predicted GO
MF	GO:0019205	nucleobase-containing compound kinase activity	IEP	Predicted GO
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Predicted GO
BP	GO:0030150	protein import into mitochondrial matrix	IEP	Predicted GO
BP	GO:0042254	ribosome biogenesis	IEP	Predicted GO
BP	GO:0042451	purine nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0042455	ribonucleoside biosynthetic process	IEP	Predicted GO
MF	GO:0042802	identical protein binding	IEP	Predicted GO
MF	GO:0042803	protein homodimerization activity	IEP	Predicted GO
BP	GO:0043085	positive regulation of catalytic activity	IEP	Predicted GO
BP	GO:0044085	cellular component biogenesis	IEP	Predicted GO
BP	GO:0044093	positive regulation of molecular function	IEP	Predicted GO
BP	GO:0044743	protein transmembrane import into intracellular organelle	IEP	Predicted GO
BP	GO:0046036	CTP metabolic process	IEP	Predicted GO
BP	GO:0046039	GTP metabolic process	IEP	Predicted GO
BP	GO:0046051	UTP metabolic process	IEP	Predicted GO
BP	GO:0046129	purine ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0046131	pyrimidine ribonucleoside metabolic process	IEP	Predicted GO
BP	GO:0046132	pyrimidine ribonucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0046134	pyrimidine nucleoside biosynthetic process	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
MF	GO:0051087	chaperone binding	IEP	Predicted GO
BP	GO:0051604	protein maturation	IEP	Predicted GO
MF	GO:0060590	ATPase regulator activity	IEP	Predicted GO
BP	GO:0065002	intracellular protein transmembrane transport	IEP	Predicted GO
BP	GO:0070585	protein localization to mitochondrion	IEP	Predicted GO
BP	GO:0071806	protein transmembrane transport	IEP	Predicted GO
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0072655	establishment of protein localization to mitochondrion	IEP	Predicted GO
CC	GO:0098799	outer mitochondrial membrane protein complex	IEP	Predicted GO
BP	GO:1901068	guanosine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901070	guanosine-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:1901659	glycosyl compound biosynthetic process	IEP	Predicted GO
BP	GO:1990542	mitochondrial transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000218	Ribosomal_L14P	22	140

External Links

No external refs found!

Solyc06g008170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation