- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Pentatricopeptide repeat (PPR-like) superfamily protein (AHRD V3.3 *** AT1G09900.1)
Gene families : OG_42_0156980 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc06g008180 | |
| Cluster | HCCA clusters: Cluster_67 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002682 | regulation of immune system process | IEP | Predicted GO |
| BP | GO:0002831 | regulation of response to biotic stimulus | IEP | Predicted GO |
| MF | GO:0003712 | transcription coregulator activity | IEP | Predicted GO |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Predicted GO |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Predicted GO |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
| BP | GO:0010112 | regulation of systemic acquired resistance | IEP | Predicted GO |
| MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
| BP | GO:0016570 | histone modification | IEP | Predicted GO |
| BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
| BP | GO:0031347 | regulation of defense response | IEP | Predicted GO |
| BP | GO:0032101 | regulation of response to external stimulus | IEP | Predicted GO |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0043543 | protein acylation | IEP | Predicted GO |
| BP | GO:0043900 | regulation of multi-organism process | IEP | Predicted GO |
| BP | GO:0045088 | regulation of innate immune response | IEP | Predicted GO |
| BP | GO:0048583 | regulation of response to stimulus | IEP | Predicted GO |
| BP | GO:0050776 | regulation of immune response | IEP | Predicted GO |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Predicted GO |
| BP | GO:0080134 | regulation of response to stress | IEP | Predicted GO |
| MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 359 | 391 |
| IPR002885 | Pentatricopeptide_repeat | 188 | 220 |
| IPR002885 | Pentatricopeptide_repeat | 470 | 516 |
| IPR002885 | Pentatricopeptide_repeat | 223 | 272 |
| IPR002885 | Pentatricopeptide_repeat | 293 | 342 |
| IPR002885 | Pentatricopeptide_repeat | 538 | 585 |
| IPR002885 | Pentatricopeptide_repeat | 398 | 447 |
| No external refs found! |