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  5. Solyc06g008460

Solyc06g008460


Description : Transport inhibitor response 1 (AHRD V3.3 *-* C7E4R3_TOBAC)


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g008460
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
At3g26810 No alias AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7] 0.03 Orthogroups_2024-Update
GRMZM2G151536 No alias RNI-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G073230.1 No alias component *(COI) of jasmonic acid receptor complex 0.03 Orthogroups_2024-Update
LOC_Os03g08850 No alias AUXIN SIGNALING F-BOX 2, putative, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
CC GO:0009317 acetyl-CoA carboxylase complex IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
CC GO:0030008 TRAPP complex IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!