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  5. Solyc06g051350

Solyc06g051350


Description : trichome birefringence-like protein (DUF828) (AHRD V3.3 *** AT3G55990.1)


Gene families : OG_42_0001869 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001869_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g051350
Cluster HCCA clusters: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
A4A49_01321 No alias protein eskimo 1 0.03 Orthogroups_2024-Update
A4A49_36147 No alias protein eskimo 1 0.03 Orthogroups_2024-Update
Bradi1g16610 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Bradi1g65530 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update
Glyma.18G026200 No alias Plant protein of unknown function (DUF828) 0.04 Orthogroups_2024-Update
LOC_Os07g49280 No alias PMR5, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G069900 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Potri.008G070200 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Potri.010G187300 No alias Plant protein of unknown function (DUF828) 0.03 Orthogroups_2024-Update
Potri.010G187600 No alias Plant protein of unknown function (DUF828) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 88 140
IPR026057 PC-Esterase 149 435
No external refs found!