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  5. Solyc06g054370

Solyc06g054370


Description : Stem-specific TSJT1 (AHRD V3.3 *** A0A0B0MRD0_GOSAR)


Gene families : OG_42_0000532 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g054370
Cluster HCCA clusters: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
At5g19140 No alias Aluminum induced protein with YGL and LRDR motifs... 0.03 Orthogroups_2024-Update
Brara.A01715.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.B00803.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C03893.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.E02595.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.H01516.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.13G207800 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
Glyma.17G016300 No alias Aluminium induced protein with YGL and LRDR motifs 0.03 Orthogroups_2024-Update
PSME_00023908-RA No alias (at5g19140 : 268.0) AILP1; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00027947-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00035384-RA No alias (at5g43830 : 282.0) Aluminium induced protein with YGL... 0.02 Orthogroups_2024-Update
Sopen01g031640 No alias Aluminium induced protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR024286 DUF3700 2 202
No external refs found!