1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc06g054440

Solyc06g054440


Description : F-box/LRR protein (AHRD V3.3 *** G7IFP9_MEDTR)


Gene families : OG_42_0006415 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006415_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc06g054440
Cluster HCCA clusters: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
Brara.C04438.1 No alias substrate adaptor *(FBL4) of SCF E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Predicted GO
MF GO:0005342 organic acid transmembrane transporter activity IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006865 amino acid transport IEP Predicted GO
MF GO:0008514 organic anion transmembrane transporter activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015171 amino acid transmembrane transporter activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0098656 anion transmembrane transport IEP Predicted GO
BP GO:1903825 organic acid transmembrane transport IEP Predicted GO
BP GO:1905039 carboxylic acid transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 90 110
IPR001611 Leu-rich_rpt 451 474
IPR001611 Leu-rich_rpt 244 267
IPR001611 Leu-rich_rpt 400 422
IPR001611 Leu-rich_rpt 270 293
IPR001611 Leu-rich_rpt 373 396
No external refs found!