Aliases : kfl00002_0070_v1.1
Description : (at5g35330 : 113.0) Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.; methyl-CPG-binding domain protein 02 (MBD02); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Methyl-CpG DNA binding (InterPro:IPR001739), Zinc finger, CW-type (InterPro:IPR011124); BEST Arabidopsis thaliana protein match is: methyl-CPG-binding domain 12 (TAIR:AT5G35338.2). & (reliability: 226.0) & (original description: no original description)
Gene families : OG_42_0001412 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001412_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Klebsormidium release: Kfl00002_0070 | |
Cluster | HCCA clusters: Cluster_83 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_00655 | No alias | methyl-cpg-binding domain-containing protein 2 | 0.02 | Orthogroups_2024-Update | |
Brara.H00659.1 | No alias | component *(MBD2) of histone deacetylation complex &... | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G061190.1 | No alias | component *(MBD1/4) of histone deacetylation complex &... | 0.03 | Orthogroups_2024-Update | |
MA_10515g0010 | No alias | (at5g35330 : 154.0) Protein containing... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0016829 | lyase activity | IEP | Predicted GO |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Predicted GO |
BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Predicted GO |
BP | GO:0017007 | protein-bilin linkage | IEP | Predicted GO |
BP | GO:0017009 | protein-phycocyanobilin linkage | IEP | Predicted GO |
CC | GO:0031011 | Ino80 complex | IEP | Predicted GO |
CC | GO:0033202 | DNA helicase complex | IEP | Predicted GO |
CC | GO:0044454 | nuclear chromosome part | IEP | Predicted GO |
CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Predicted GO |
CC | GO:0097346 | INO80-type complex | IEP | Predicted GO |
CC | GO:1904949 | ATPase complex | IEP | Predicted GO |
No external refs found! |