Coexpression cluster: Cluster_83 (HCCA clusters)

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 16.67% (26/156) 1.79 0.0 8e-06
GO:0097159 organic cyclic compound binding 22.44% (35/156) 1.12 8e-06 0.000711
GO:1901363 heterocyclic compound binding 22.44% (35/156) 1.12 8e-06 0.000711
GO:0016874 ligase activity 3.85% (6/156) 3.05 8.5e-05 0.006021
GO:0006520 cellular amino acid metabolic process 3.85% (6/156) 2.97 0.000119 0.006755
GO:0043038 amino acid activation 2.56% (4/156) 3.58 0.000334 0.008605
GO:0016875 ligase activity, forming carbon-oxygen bonds 2.56% (4/156) 3.58 0.000334 0.008605
GO:0004812 aminoacyl-tRNA ligase activity 2.56% (4/156) 3.58 0.000334 0.008605
GO:0043039 tRNA aminoacylation 2.56% (4/156) 3.58 0.000334 0.008605
GO:0043231 intracellular membrane-bounded organelle 4.49% (7/156) 2.38 0.00041 0.008929
GO:0043227 membrane-bounded organelle 4.49% (7/156) 2.38 0.00041 0.008929
GO:0005488 binding 29.49% (46/156) 0.74 0.0002 0.009455
GO:0006418 tRNA aminoacylation for protein translation 2.56% (4/156) 3.7 0.00024 0.009697
GO:0016070 RNA metabolic process 5.77% (9/156) 1.96 0.000552 0.01116
GO:0005634 nucleus 3.85% (6/156) 2.45 0.000839 0.015837
GO:0000398 mRNA splicing, via spliceosome 1.28% (2/156) 4.98 0.00165 0.022239
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.28% (2/156) 4.98 0.00165 0.022239
GO:0000375 RNA splicing, via transesterification reactions 1.28% (2/156) 4.98 0.00165 0.022239
GO:0140098 catalytic activity, acting on RNA 3.85% (6/156) 2.32 0.001313 0.023226
GO:0140101 catalytic activity, acting on a tRNA 2.56% (4/156) 3.04 0.001422 0.023677
GO:0006082 organic acid metabolic process 3.85% (6/156) 2.21 0.001968 0.02422
GO:0043436 oxoacid metabolic process 3.85% (6/156) 2.22 0.0019 0.024445
GO:0019752 carboxylic acid metabolic process 3.85% (6/156) 2.26 0.001646 0.025872
GO:0006399 tRNA metabolic process 2.56% (4/156) 2.84 0.002373 0.02798
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_229 0.021 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_101 0.022 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_199 0.023 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_20 0.031 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_97 0.02 Orthogroups_2024-Update Compare
Arabidopsis thaliana HCCA clusters Cluster_231 0.021 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_3 0.023 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_59 0.024 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_84 0.02 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_137 0.042 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_18 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_151 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_238 0.02 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_245 0.023 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_275 0.028 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_88 0.02 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_162 0.028 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_86 0.026 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_214 0.02 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_7 0.037 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_1 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_98 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_116 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_169 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_189 0.02 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_198 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_286 0.035 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_317 0.022 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_323 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_370 0.025 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_409 0.029 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_419 0.021 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_443 0.026 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_466 0.023 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_481 0.023 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_9 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_75 0.02 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_120 0.024 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_130 0.02 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_203 0.029 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_205 0.029 Orthogroups_2024-Update Compare
Oryza sativa HCCA clusters cluster_0050 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0026 0.027 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0034 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0079 0.025 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0153 0.021 Orthogroups_2024-Update Compare
Populus trichocarpa HCCA clusters cluster_0172 0.021 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_44 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_73 0.02 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_155 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_10 0.022 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_118 0.029 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_226 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_11 0.027 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_48 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_69 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_189 0.023 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_202 0.027 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_56 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_58 0.029 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_60 0.035 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_76 0.031 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_55 0.024 Orthogroups_2024-Update Compare
Sequences (156) (download table)

InterPro Domains

GO Terms

Family Terms