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  5. Kfl00008_0470

Kfl00008_0470 (kfl00008_0470_v1.1)


Aliases : kfl00008_0470_v1.1

Description : (at1g57860 : 268.0) Translation protein SH3-like family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: ribosome, cytosolic large ribosomal subunit; EXPRESSED IN: juvenile leaf; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Ribosomal protein L21e (InterPro:IPR001147), Ribosomal protein L21e, conserved site (InterPro:IPR018259); BEST Arabidopsis thaliana protein match is: Translation protein SH3-like family protein (TAIR:AT1G57660.1); Has 1436 Blast hits to 1436 proteins in 381 species: Archae - 214; Bacteria - 0; Metazoa - 706; Fungi - 179; Plants - 136; Viruses - 0; Other Eukaryotes - 201 (source: NCBI BLink). & (reliability: 536.0) & (original description: no original description)


Gene families : OG_42_0002269 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00008_0470
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
170832 No alias Translation protein SH3-like family protein 0.07 Orthogroups_2024-Update
A4A49_17708 No alias 60s ribosomal protein l21-2 0.03 Orthogroups_2024-Update
A4A49_24703 No alias 60s ribosomal protein l21-2 0.02 Orthogroups_2024-Update
At1g57660 No alias 60S ribosomal protein L21-2... 0.02 Orthogroups_2024-Update
Bradi1g75620 No alias Translation protein SH3-like family protein 0.06 Orthogroups_2024-Update
Bradi3g28220 No alias Translation protein SH3-like family protein 0.09 Orthogroups_2024-Update
Brara.F00615.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.F00624.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.01 Orthogroups_2024-Update
Brara.H02804.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Brara.H02810.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.I01623.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.I05263.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Cre06.g278135 No alias Translation protein SH3-like family protein 0.08 Orthogroups_2024-Update
GRMZM2G026216 No alias Translation protein SH3-like family protein 0.02 Orthogroups_2024-Update
GRMZM2G149257 No alias Translation protein SH3-like family protein 0.06 Orthogroups_2024-Update
Glyma.03G207500 No alias Translation protein SH3-like family protein 0.07 Orthogroups_2024-Update
Glyma.06G207400 No alias Translation protein SH3-like family protein 0.02 Orthogroups_2024-Update
Glyma.19G205000 No alias Translation protein SH3-like family protein 0.09 Orthogroups_2024-Update
HORVU1Hr1G038890.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
MA_40819g0010 No alias (at1g57860 : 290.0) Translation protein SH3-like family... 0.04 Orthogroups_2024-Update
PSME_00039521-RA No alias (at1g57860 : 292.0) Translation protein SH3-like family... 0.03 Orthogroups_2024-Update
Potri.003G159500 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
Potri.006G195400 No alias Translation protein SH3-like family protein 0.05 Orthogroups_2024-Update
Potri.016G061100 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
Pp1s107_181V6 No alias 60s ribosomal protein l21 0.09 Orthogroups_2024-Update
Pp1s1_780V6 No alias 60s ribosomal protein l21 0.06 Orthogroups_2024-Update
Pp1s298_23V6 No alias 60s ribosomal protein l21 0.04 Orthogroups_2024-Update
Pp1s91_107V6 No alias 60s ribosomal protein l21 0.07 Orthogroups_2024-Update
Seita.9G229600.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Seita.9G544700.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.001G226500.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Sobic.001G508900.1 No alias component *(eL21) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Solyc10g078960 No alias 60S ribosomal protein L21-like protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc10g080590 No alias 60S ribosomal protein L21-like protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Sopen10g029590 No alias Ribosomal protein L21e 0.06 Orthogroups_2024-Update
Sopen10g031130 No alias Ribosomal protein L21e 0.07 Orthogroups_2024-Update
evm.model.contig_4456.21 No alias (at1g57860 : 119.0) Translation protein SH3-like family... 0.08 Orthogroups_2024-Update
evm.model.tig00000640.5 No alias (at1g57860 : 125.0) Translation protein SH3-like family... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP Predicted GO
CC GO:0015934 large ribosomal subunit IEP Predicted GO
MF GO:0017025 TBP-class protein binding IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0044391 ribosomal subunit IEP Predicted GO
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!