Coexpression cluster: Cluster_47 (HCCA clusters)

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 4.82% (11/228) 2.61 2e-06 9.8e-05
GO:0043043 peptide biosynthetic process 4.82% (11/228) 2.57 3e-06 0.000101
GO:0006412 translation 4.82% (11/228) 2.63 2e-06 0.000106
GO:0005840 ribosome 4.82% (11/228) 2.63 2e-06 0.000106
GO:0006518 peptide metabolic process 5.26% (12/228) 2.66 0.0 0.000112
GO:0043603 cellular amide metabolic process 5.26% (12/228) 2.56 1e-06 0.000115
GO:0043604 amide biosynthetic process 4.82% (11/228) 2.5 4e-06 0.000139
GO:0005198 structural molecule activity 4.82% (11/228) 2.45 6e-06 0.000179
GO:1990904 ribonucleoprotein complex 4.82% (11/228) 2.35 1.1e-05 0.000219
GO:0043232 intracellular non-membrane-bounded organelle 4.82% (11/228) 2.35 1.1e-05 0.000219
GO:0043228 non-membrane-bounded organelle 4.82% (11/228) 2.35 1.1e-05 0.000219
GO:0034645 cellular macromolecule biosynthetic process 6.58% (15/228) 1.95 9e-06 0.000235
GO:0044444 cytoplasmic part 6.14% (14/228) 1.94 2e-05 0.000361
GO:0009059 macromolecule biosynthetic process 6.58% (15/228) 1.82 2.5e-05 0.000425
GO:0005622 intracellular 3.07% (7/228) 2.47 0.000279 0.00447
GO:1901566 organonitrogen compound biosynthetic process 4.82% (11/228) 1.61 0.001037 0.015553
GO:0044249 cellular biosynthetic process 7.02% (16/228) 1.24 0.00138 0.019476
GO:0009058 biosynthetic process 7.46% (17/228) 1.13 0.002078 0.026254
GO:1901576 organic substance biosynthetic process 7.02% (16/228) 1.18 0.002069 0.027588
GO:0034641 cellular nitrogen compound metabolic process 9.21% (21/228) 0.97 0.002676 0.032113
GO:0043226 organelle 4.82% (11/228) 1.42 0.002962 0.032311
GO:0043229 intracellular organelle 4.82% (11/228) 1.42 0.00289 0.03303
GO:0044267 cellular protein metabolic process 7.46% (17/228) 1.07 0.003298 0.034411
GO:0044271 cellular nitrogen compound biosynthetic process 4.82% (11/228) 1.34 0.004416 0.044158
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
Solanum lycopersicum HCCA clusters Cluster_102 0.025 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_58 0.029 Orthogroups_2024-Update Compare
Solanum pennellii HCCA clusters Cluster_84 0.026 Orthogroups_2024-Update Compare
Chlamydomonas reinhardtii HCCA clusters Cluster_58 0.035 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_20 0.021 Orthogroups_2024-Update Compare
Picea abies HCCA clusters Cluster_90 0.025 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_7 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_13 0.022 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_130 0.021 Orthogroups_2024-Update Compare
Physcomitrella patens HCCA clusters Cluster_298 0.023 Orthogroups_2024-Update Compare
Porphyridium purpureum HCCA clusters Cluster_25 0.038 Orthogroups_2024-Update Compare
Selaginella moellendorffii HCCA clusters Cluster_23 0.021 Orthogroups_2024-Update Compare
Pseudotsuga menziesii HCCA clusters Cluster_133 0.021 Orthogroups_2024-Update Compare
Brachypodium distachyon HCCA clusters Cluster_57 0.031 Orthogroups_2024-Update Compare
Glycine max HCCA clusters Cluster_76 0.029 Orthogroups_2024-Update Compare
Nicotiana attenuata HCCA clusters Cluster_29 0.024 Orthogroups_2024-Update Compare
Cyanophora paradoxa HCCA clusters Cluster_21 0.028 Orthogroups_2024-Update Compare
Zea mays HCCA clusters Cluster_35 0.025 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_8 0.022 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_10 0.032 Orthogroups_2024-Update Compare
Brassica rapa HCAA Clusters Cluster_254 0.027 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_40 0.033 Orthogroups_2024-Update Compare
Hordeum vulgare HCAA Clusters Cluster_168 0.02 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_24 0.035 Orthogroups_2024-Update Compare
Sorghum bicolor HCAA Clusters Cluster_110 0.022 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_37 0.025 Orthogroups_2024-Update Compare
Setaria italica HCAA Clusters Cluster_85 0.02 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_31 0.019 Orthogroups_2024-Update Compare
Marchantia polymorpha HCAA Clusters Cluster_61 0.028 Orthogroups_2024-Update Compare
Sequences (228) (download table)

InterPro Domains

GO Terms

Family Terms