1. Home
  2. Species
  3. Klebsormidium nitens
  4. Sequence
  5. Kfl00020_0360

Kfl00020_0360 (kfl00020_0360_v1.1)


Aliases : kfl00020_0360_v1.1

Description : (at5g44180 : 223.0) Homeodomain-like transcriptional regulator; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501), Homeobox (InterPro:IPR001356), DDT domain (InterPro:IPR004022), Homeodomain-like (InterPro:IPR009057), DDT domain, subgroup (InterPro:IPR018500), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeobox-1 (TAIR:AT1G28420.1). & (reliability: 446.0) & (original description: no original description)


Gene families : OG_42_0002727 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002727_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Klebsormidium release: Kfl00020_0360
Cluster HCCA clusters: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
At1g28420 No alias Homeobox-DDT domain protein RLT1... 0.02 Orthogroups_2024-Update
GRMZM2G125294 No alias Homeodomain-like transcriptional regulator 0.02 Orthogroups_2024-Update
LOC_Os05g48820 No alias DDT, putative, expressed 0.01 Orthogroups_2024-Update
PSME_00018891-RA No alias (at5g44180 : 906.0) Homeodomain-like transcriptional... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000176 nuclear exosome (RNase complex) IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
BP GO:0000469 cleavage involved in rRNA processing IEP Predicted GO
BP GO:0007030 Golgi organization IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
BP GO:0010970 transport along microtubule IEP Predicted GO
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP Predicted GO
BP GO:0031503 protein-containing complex localization IEP Predicted GO
BP GO:0042073 intraciliary transport IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0090501 RNA phosphodiester bond hydrolysis IEP Predicted GO
BP GO:0098840 protein transport along microtubule IEP Predicted GO
BP GO:0099111 microtubule-based transport IEP Predicted GO
BP GO:0099118 microtubule-based protein transport IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
InterPro domains Description Start Stop
IPR018501 DDT_dom 703 754
IPR028941 WHIM2_dom 1233 1304
IPR001356 Homeobox_dom 35 86
IPR028942 WHIM1_dom 1131 1173
No external refs found!